Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2406 ATGGATGTTATTATTTCAGTTGCTGCTAAGATTTCTGAGTATACGGTTGTACCTATTGGTTGTCAATTTGGTTACATACTATACTACAAAGGAAACCTTCAAAGGATGAAAATTGAGGTCCAAAAGCTCGAAGGATCAAAAGATCATGTGCAGCACAGTGTTGATGAGGCTAGAAGGAACGGAGAAGAGATTGAAAATATTGTCCTGAAGTGGCTGAATGGTGTGGACAACACTGTTGCTGAGGCAAAGAAACTTATTGACACTCAGGGCCATGAAAAATCTCAATGTTCTATGAGATATTTTCCCAATCTGTGCACAAGGCATCAACTGAGTAGGAAAAGCAAAAAGATGATACATGAGATTTCTGAAGTTCTCGCAGAAGGAAAATTTGACAGAATTTCTTACCGTGCTTCTTCTCAATTGACAGTCACGCCATTTGGTCGAGGTTATGAGGCCCTGGACTCCAGAACATCAATGTTGAATGAGATTATGCTGGCATTGAAGAATCCTAACATCTTCATGATTGCGGTGTATGGGATGGGTGGAGTGGGCAAGACAACACTGGTGAAAGAGTTAGCTTGGCAAGCTGAGAATGATGGATCATTTAGTTCTGTAGTTATAGCTACTATCACTGAATCTCCAGATGTGGAAAAAATTCAAGGCCAAATTGTTGATGCCTTGGATATGAAATTTAACAAGGAAAGCATAGAAGGAAGAGCAACACAGTTACGGAATAGGATAATCATGGAGAAGAGTATTCTTGTTATTCTTGATGATATCTGGGGTAGACTTGATTTGGTAGAAGTGGGGATTCCTTTTGGGGATGACCACAAAGGATGCAAGTTGGTGGTGACATCCAGAGATCTTAATGTGTTAAACTGTGAGATGAACATTCAGAAAGCTTTTAGACTTGATGTTTTGCATCAGGAGGATAGTTGGAAATTGTTTGAGAAAATGGCAGGTGATATTGTTCATGAATTTAATATAAAGCCAATTGCGGTAGAAGTGGCCAGATGTTGTGCCGGGTTACCTCTTTTGATAGTTACTGTGGCGAAGGCTTTGAGAAAAAAAGAAGCCTCCGCTTGGAAGAATGCCTTAAACCAATTGGAGAGATTTGATCAACAAGGTTTGCATAAGAAAGTCTACTCTACCTTGGAATTGAGTTATAATTGTTTAGAAAGGGATGACCTGAAGTCACTCTTCCTTTTAATTGGTTCATTTGGACTGGACCATATCCACACTGGAACGTTGTTTCAATGTTATTGGAGTTCAGGGTTATGTGAACATCTTCACACATTGACAGAGGCACGGAATCAATTTTTCAACTTAATAAATGACCTTAGGGCCTCTTCATTGTTGCTTGAACGTGAAAGAGGTCGAGTAAGAATGCATGATGTTGTACGTGATGTAGCTAAATCAATTGCATCTAGGTTTCATCGTACTTATTCTGTGAAAAGGTACTCCGAAGTCAAACAATGGCCAATGATAGATCAGCTTCAAAAGTTCCATCAAATCATTTTGCCTTGGTCTTATATTAATGAGCTTCCTGAGAAGTTGGAGTGCCCAGAGTTGAGGCTACTTCTACTTCATAATATAGGCGACAATTTGAAAGTCTCTGATGAGTTTTTCTCTGGGATGAGAGAAGTAAGAGTTCTAGATTTGTATGGAATGATGTTAACCCCTTCCCCACCTCCATCTCTCTCTTTCTTGACAAACCTTCAAACATTGACTCTGGGGGGATGTGAGTTAGAAGACATATCAATAGTTTTGGAACTGAAAAGTTTAGAGATTCTCAGCCTTGAAAGATCTGACATTATACAGCTCCCAGAAGAAATAGGACAACTAACCAATCTTCGAATGCTGAATTTAACCAACTGCTCTAGGTTGAGATTCATTCCTGCAAATCTTATTTCAAGCTTAACATGCTTAGAAGAGTTGTACATGGGAAATTGCTTTATCCAATGGGATGTCAAGAGAAGCAAAGACCAAAGCAACAATGCAAGTCTGGAAGAGCTAGGTAATCTGTCACATCTAACAACTTTGGACATCATGATTCAAGATTCTTCAGTTTGGCCAATGGACTTGCAAGTCTTTGCAAAGCTTGAGAGATACAATATATTTATTGGTGATGTATGGAAATGGTCTTTGGAATGGGCTGGAGGTGCTTCTGAATCTTCAAGAACACTGAAGCTGGCAGAGAGTAAGAGTACAAGCATTCATTCAGATTATGGATTTAACTTATTGTTGAATTCAGCGGAGGATTTGTGCGTAGCTCAATTACAACGTGCTAGAGGTGTCCTTTACGAGTTGAACATGGAAGGTTTTCCACAATTAAAGCATTTGTGCATCGAAGACAGTTCTGAACTGGAGTGCATTGTTAATTCAATAGGTTGCTTTTATCCCTACCCCGCCTTCCCCAACTTAGAGACTTTAGCTCTTCAAAATCTGTTTAATCTGGAAGAAATATGTCATGGACCAATTCCAATTCAATCTTTTTCCAAGCTGAAATTTATTCAAGTCAATGGTTGCGATAAGTTGAAGCATCTGTTTTCATATTCTCTAGTTAGAGATCTTCCTCAACTTCTTGAAATAAAAATTTCGGATTGCAAAATGATTACAGAAATCATAGCTGAGCAAACATCTGAGGATGATATAGAAGTAAACAAGGTTATGTTCCCCAAGTTGCGTTTACTTGAACTTGAATGTTTGCCTGGTCTCAGTAGTTTCTGCTCTGTGCCATTGGCAGTTGAAAATTATGAAGATACACGGTGCATGGCACTAATTGATCAAAAGGTTGGAATGTCCCAACTGGAGACCTTGAAGCTGTCTAAGATCAATTCTTGTAAATTATGGGATGACATACAATCGGGTTATTCTTGTGTTCAAAACTTGACAAGTTTGACAGTTGACAAATGTGATAAGATAACTTACATATTCTCATCCGTAGTGGCTAGAGAACTTGTAACCCTGCAATATCTTGAGATTAGTAACTGCCAAATGTTGGAGGACATAATTTCCTGGGATGCAATTTTAGGCAATCATTCTTCATCTCCAGAACCACTCTCTAATGAGGATGTTATATTCCCAAACTTAGTAACATTGATAATCTCCCATTTAGATCACTTGAAGTCAGTATGGCACAAACAACTTGGTCTGAATTCCTTCCATAAATTGAAGCATCTGGAAACTAAATTCTGCGATAAATTATTAAATATATTCCCATCTCATGTTTTTGAAAACTTGCAGAATCTAGAGACAATAATCGTAACCAATTGTCCTGCACTGGAAGTTCTATTTGAAATGCAAGATTTTAAAACAGGAGCTCGTAGCCAGATGCAATTGAGGAATCTTTCTTTGGAGCATTTACCAAATCTTAAACACATATGGAGTAGAAATCCTTATGGAAGCTTAAGGTTTCAAAACCTAGGTCAACTGAAAGTTGTTGAATGTAAAAGCCTTGATCATATTTTTCCATTATATGTGGCCAAAGAACTTCCATATCTCCAAGTGCTTCATATAGAAGAGTGCGGTGTAGAGACTATTGTTGCAAAGGATGAAATGGCTGACACAGTTCCAATACTTGTTTTCCCAAAATTAACATCTTTGAGTCTCCGAAGTTTAGCTCAACTTAGAAGCTTCTGCTATGGATTACACACCTTGCATGTGCCTGTCTTAAGAGATTTGGATGTGTATCATTGTGATCAGCTAGAATTATTCGTGCAGAAATTTCTAAACTATCAGGGTAATACCCCGGTTGATCCAGAAGCCCTACTGTCATTTGAAAAGGTTGTCCCAAACCTAAGGGAGCTTATTCTGAACGGAAGGGATGTTACTATGTTATGGAACAGTCAATTTAATCACAGGCCGATTTATACAGTAAAAGATCTTCGCTTGCGTTGTTTTCACAATGAGTCTGAAATATTTCCATACAGCTTCCTCCAAAGATTTATCAATCTTGAAAAACTTATGGTGACTTGCAGTTCCTTCACAGAAATTTTCTCAAGTGGAAGCTTTGACACTGGACATTCGGAAACAACAATGAAGTTGAAAAAGCTAGTACTTGTTGAATTACATAACCTTGAGTTTATATGTGGAGACAATTCTGATATGCAGTTTGCTGTTCAAAATCTTGAAGTATTTGAAGTATTCAAATGTTCCATACTAAGGAATATAGTTCCATCCTCGGTGCGATTTGAGAAGTTAGAGAGAGTGAGAGTGGCCTTTTGTGTTGGAGTGGAAAATATTATGTTATCATCAATTGCTACTAATTTACCTAAACTTCGGAAATTAGTTATAGACAATTGTGAAATGATAGAAGTAATAGTTGCAAGTAATAAAGAAAATGATGCTGGTGAGCTAGCTTTCTTGAAATTGGAGTTTTTGCGATTGTATAACTTACCACACTTAAGAAGTTTTTACAAGGGAAATTACAACCTCAAATTTCCATTGCTGCAGAAGTTAGTCGTGGGAAAATGTGACATGATAGAAACTTTCTCAAATGGAGTGTTGAGCGCACCAAAACTCAGAGCAGTACATGTGACTCCTAGTTTAAAAGGTCCATGGAGTTGGAATGGTGATCTTAATACTACAATAGAAAAACTTTTTGCTGAAAAGCTATATGAGAAGGAAAAGTGCATTACTGCACTTTGA 4650 0.3785 MDVIISVAAKISEYTVVPIGCQFGYILYYKGNLQRMKIEVQKLEGSKDHVQHSVDEARRNGEEIENIVLKWLNGVDNTVAEAKKLIDTQGHEKSQCSMRYFPNLCTRHQLSRKSKKMIHEISEVLAEGKFDRISYRASSQLTVTPFGRGYEALDSRTSMLNEIMLALKNPNIFMIAVYGMGGVGKTTLVKELAWQAENDGSFSSVVIATITESPDVEKIQGQIVDALDMKFNKESIEGRATQLRNRIIMEKSILVILDDIWGRLDLVEVGIPFGDDHKGCKLVVTSRDLNVLNCEMNIQKAFRLDVLHQEDSWKLFEKMAGDIVHEFNIKPIAVEVARCCAGLPLLIVTVAKALRKKEASAWKNALNQLERFDQQGLHKKVYSTLELSYNCLERDDLKSLFLLIGSFGLDHIHTGTLFQCYWSSGLCEHLHTLTEARNQFFNLINDLRASSLLLERERGRVRMHDVVRDVAKSIASRFHRTYSVKRYSEVKQWPMIDQLQKFHQIILPWSYINELPEKLECPELRLLLLHNIGDNLKVSDEFFSGMREVRVLDLYGMMLTPSPPPSLSFLTNLQTLTLGGCELEDISIVLELKSLEILSLERSDIIQLPEEIGQLTNLRMLNLTNCSRLRFIPANLISSLTCLEELYMGNCFIQWDVKRSKDQSNNASLEELGNLSHLTTLDIMIQDSSVWPMDLQVFAKLERYNIFIGDVWKWSLEWAGGASESSRTLKLAESKSTSIHSDYGFNLLLNSAEDLCVAQLQRARGVLYELNMEGFPQLKHLCIEDSSELECIVNSIGCFYPYPAFPNLETLALQNLFNLEEICHGPIPIQSFSKLKFIQVNGCDKLKHLFSYSLVRDLPQLLEIKISDCKMITEIIAEQTSEDDIEVNKVMFPKLRLLELECLPGLSSFCSVPLAVENYEDTRCMALIDQKVGMSQLETLKLSKINSCKLWDDIQSGYSCVQNLTSLTVDKCDKITYIFSSVVARELVTLQYLEISNCQMLEDIISWDAILGNHSSSPEPLSNEDVIFPNLVTLIISHLDHLKSVWHKQLGLNSFHKLKHLETKFCDKLLNIFPSHVFENLQNLETIIVTNCPALEVLFEMQDFKTGARSQMQLRNLSLEHLPNLKHIWSRNPYGSLRFQNLGQLKVVECKSLDHIFPLYVAKELPYLQVLHIEECGVETIVAKDEMADTVPILVFPKLTSLSLRSLAQLRSFCYGLHTLHVPVLRDLDVYHCDQLELFVQKFLNYQGNTPVDPEALLSFEKVVPNLRELILNGRDVTMLWNSQFNHRPIYTVKDLRLRCFHNESEIFPYSFLQRFINLEKLMVTCSSFTEIFSSGSFDTGHSETTMKLKKLVLVELHNLEFICGDNSDMQFAVQNLEVFEVFKCSILRNIVPSSVRFEKLERVRVAFCVGVENIMLSSIATNLPKLRKLVIDNCEMIEVIVASNKENDAGELAFLKLEFLRLYNLPHLRSFYKGNYNLKFPLLQKLVVGKCDMIETFSNGVLSAPKLRAVHVTPSLKGPWSWNGDLNTTIEKLFAEKLYEKEKCITAL* 1550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2406 1549 CDD AAA 156 286 - -
Mtr2g2406 1549 PRINTS Disease resistance protein signature 174 189 - -
Mtr2g2406 1549 PRINTS Disease resistance protein signature 247 261 - -
Mtr2g2406 1549 PRINTS Disease resistance protein signature 340 354 - -
Mtr2g2406 1549 PRINTS Disease resistance protein signature 613 629 - -
Mtr2g2406 1549 SUPERFAMILY RNI-like 773 943 - -
Mtr2g2406 1549 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 404 IPR027417 -
Mtr2g2406 1549 Gene3D Ribonuclease Inhibitor 922 1372 IPR032675 -
Mtr2g2406 1549 Coils Coil 40 60 - -
Mtr2g2406 1549 Gene3D Ribonuclease Inhibitor 1376 1536 IPR032675 -
Mtr2g2406 1549 Gene3D Ribonuclease Inhibitor 508 921 IPR032675 -
Mtr2g2406 1549 Gene3D - 306 393 IPR042197 -
Mtr2g2406 1549 SUPERFAMILY RNI-like 1264 1513 - -
Mtr2g2406 1549 PANTHER - 1113 1219 - -
Mtr2g2406 1549 PANTHER - 1365 1513 - -
Mtr2g2406 1549 PANTHER - 1 1124 - -
Mtr2g2406 1549 SUPERFAMILY L domain-like 462 1166 - -
Mtr2g2406 1549 Gene3D - 145 301 IPR027417 -
Mtr2g2406 1549 SMART AAA_5 171 302 IPR003593 -
Mtr2g2406 1549 PANTHER RPP4C3 1 1124 - -
Mtr2g2406 1549 PANTHER RPP4C3 1113 1219 - -
Mtr2g2406 1549 PANTHER RPP4C3 1365 1513 - -
Mtr2g2406 1549 Pfam NB-ARC domain 159 390 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2406 Mtr-Chr2 36225675 36234499 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2406 162 490 WRKY Transcription Factor Family AT5G45050 26.686 2.95e-10 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2406 - - mtr:MTR_2g071860 2092