Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2404 ATGGATGGTATTATTTCAGTTGCTGCTAAAATTGCTGAGTATATGGTTGTACCTATTGGTCGTCAATTTGGTTACATACTCTACTACAAGGACAACCTTCAAAGGATGGAAACTGATGTCCAAAAGCTAGAAGGAACAAAAGATAGTGTGCAACGCAAAGTTGACGAGGCTAGAAATAATGGAGAAGAGATTGAAAAGTTTGTCCAGGACTGGCTGAACAGTGTGGACAACATGGTTGCTGAGGCAAAGAAACTTATTGACAGTGAAGGCCATGCAAAAGCTCAGTGCTCTATGGGCCACCTTCCCAATCTGTGCACAAGGCACCAACTGAGCAGGGAGACCAAAAAGATGTCGCAAGATATTTCTAATATCCTAGCCGATGGAAAATTCGACAAAGTTTCTTACCGTACTGCTTCGCAAGTGACAGTCTCGTCATTTGGTAGAGGTTATGAGGCTTTGGACTCCAGAACATTAGTGTTGGATGAGATTATGCTGGCATTGAAGGATCCTAACTTCTTCATTATTGGTGTTTATGGGATGGGTGGAGTGGGCAAAACTACACTAGTGGAAGAGCTAGCTTCGAAAGCAGAGAATGGTGGCTCATTTAATGCGGTTGTTTTGGCTACTATAAGTGATTCTCCAGATGTAGAAAAAATTCAAAGCCAAATTGCTGAGATGTTGGATATGAAATTCACCAAGGAGACCAGAGACGGAAGAGCAAGAGAATTACGAGATAGGATAAAAAAGAAGAAGAGTATTCTTGTTATTCTGGATGACATCTGGGGTAGACTTGATTTGGTAGAAGTGGGGATTCCTTTTGGCGACGACCACAAAGGATGCAAGTTAGTGGTGACATCTAGAGATCTTAATGTGTTGAGCTGTGAGATGGGCACTCAGAAAGAATTCAGACTTGAAGCTTTGCATGAGGAGGATAGTTGGAAATTGTTTGAGAAAATGGCAGGTGATGTTGTTCAAGAATTCAATATAAAGCCAATTGCAGTGGAGGTGGCCAAACGTTGTGCAGGTTTGCCCCTTTTGATTGTTACTGTTGCTAAGGCTTTGAGGAAAAAAAAGATCTTTGATTGGCAAAACACATTAAATGATTTAGAGAGATTTGATCAAGAAGGGCTGCATAACGACAAGAGAATCAATTCTACTTTGGAGTTGAGTTATAATTTCCTAGAAAGTGATGAACTGAAGTCATTGTTCTTATTCATTGGTTCGTTTGGAGTAGATCACCTCCACACTGGAGAACTATTTTCATATTATTGGGGATTGTGCTTATACAAACATTCCCGCACATTGACACAAGCAAGATCCAAATACTACAAATTAATAAATGACCTAAAGGCCTCTTCACTGCTACTTGAGTCTGAAACCGAGTGGATTAGAATTCATGATGTTGTTAGATCTGTGGCTAAATCAATCGCATCTAAGACTCAACCACCAACTTTTGGGATGAAAAGGTACAATGAAGTAAAACAATGGCCAGGGATGGATGAGCTTCGAAAATGCCATCAGATCATCTTGCCTTGGTCTTATATTTACAAGCTTCCTGAGAAGCTGGTGTGTCCAAAGTTGGAGCTACTTCAACTTGAAAATATAGGTGATTATTTGGAAGTCCCCAACGACTTATTCTCTGGGATGAGAGAGTTAAAAGTCGTTAGTTTATATGGAATGATGTTTACCCCTTCTCTACCATCATCTCTTCATCTCTTGACAAAAATCCGAACATTGGATTTGGCTGGATGTGTGTTTGAAGACATATCAATAGTGGCAGAGCTGAAGAGTTTAGAGATTCTCAGCCTTGAAAGATCAGATATTACAGAACTCCCTAAAGAAATAAGACAACTAACTAATCTTCGAATGCTGAACTTAGCCAATTGCTCTAGACTGAGATTCATTCCTGCAAATCTTATTTCAAGCCTAACTTGCTTGGAAGAGTTGTACTTGGGGAATTGTTTTATCGAGTGGAATGTAAAGGGAAGCAAAGAACAAAGCAACAGTGCATGTCTAGATGAGCTAAGGAATTTGTCTCATCTAACTACTTTAGACATAATGATTCGAGATGCTTCAGTTTTGCCAAGGGACTTGCAGGTCTTTGGAAAGCTTGAAAGATACAACATATTTGTTGGTGATATGTGGAAATGGTCTTTGGATTGGTCTGGAGGTGCTTCTGAACCTTCAAGAATACTTAAGCTCGCAGACAATGGGTGTTCAAGTATTCATTTGGATTGTGAGTTTAACTTCTTGTTGAATTCAGCTGAGGACATGTGCCTTGCAAAAATACATTGTGTTAGAAATTTTCTTTGTGAACTTAACAGGAATGGTTTTCCGCAATTAAAGCATATGTGCATTCAAGACATTGCTGATATGAAGTACATCATTAACTCGATGCTTTACCCAACTTATCATGCTTTGCCCAACTTAGAGACTTTGGTTCTTCAAAATCTGTTTAACCTGGAAGAAATATGCCATGGGCCAATTCCAATTCAATCTTTTACCAAACTAAGATCTTTTGAAGTCAAAGGTTGTGACAAGTTGAATAATCTGATATGTTATTCCCTTGTTACAGATCTTCCCCTACTTCGTGAAATAAAAATTTCTAATTGCAAAATGATGACAGAAATCATGGCTGTGCAAACATCTAAGGTAGAAAAAGGAATGGGGAAGATTATCTTCCCCGAGCTACGTTCTCTTGAACTTGAATGTTTGCCAAGTCTCGTAAGTTTATGTTCCGTGCCATTGACAATTGAAAAGAGTCTCAAAGTGCGTGGTGAAAATTATGATAGTACACAATGCATACCTGTGGCACTAATTGATCAAAAGGTTGAGATGCCCCACCTTGAACTATTGAAGCTCTCTAAGATCAAATCTAGGAAACTGTGGGATGATAAACTTCCGAGTCGTTCTTGGATGCAAAACTTGAGAAGTTTGACAATAGACGGATGTGATAACATAGCATGCATATTCTCATCCTCGGTCGCCAGAGAATTTGTAAACCTGAAGCAACTTGTGATTAGTAATTGCCAAATGTTGGAGGGCATATTTGTCCCTGATGGAAAGTTGGGTAGTCTTCCTTTGTCTCAGAAACCATTCTCTAATGATGAGGTTATATTTCCAAACTTGGAGACATTGGTAATCTCCCATATGGAACACTTGAAGTTTGTATGGTACAATCAACTAACTCCAAATTCCTTTGGCAAACTGAAGGAGTTAAAAATTGAATTATGCAATGAAATTTCAAATGTAATTCCATCTTATGTGCTTGATAAATTACTGAATCTGGAGACTGTGACCGTAGTTTGTTGTCATACACTAGAAGTTGTATTTGAAACACAAGGTCTAAAAGTAGACGGTGGTAGACAGACAAAGCTGGAAATGCAATTGAGAACTCTCACTTTGAACCATTTACCGATGCTGAAACACATTTGGAGTGGGAATCCTAATGAAAGTGTTAAGTTCCAAAACCTCTGCCTTTTGCAAGTTACTGGATGCGAAAGCCTCAATTATGTTTTGCCCCTCTCTGTGGCTAAAGAGCTTCAGAATCTCCAAGGGATTTATATAAAAGAATGTGGCGTTGAGATTATTGTAGAACAAGATGAAATGTCTGACACAGTTCCAATACTTAATTTCCCAGAATTAACATTTTTGAGTTTTCGAGATTTGAAACAACTTCAAAGCTTCTACCGTGGATTACTTACCCTGGATTGTCCTGCTTTAAGACATGTGGATGTGCTTCATTGTGACAAGCTCGTCCTATTCAAACCAAAGTCTATAAATTACCAAGAAATTGTCCCAGTTGATACAAAATCCCTTCTCTCAATTGAACAGATTGTCCAAAACAAAGGGGAGCTTATTCTGAACAGCAAGGATGTCACCATGGCATGCAATGGTCACCTTAATGATGAGCTTATCAACACAGTAACAGCTCTTTGCTTGCGATGTTTTCACGATGTGTCTGAAAAGTTTCCATCTGGTTTCCTCCAAAGGTTCATCAATCTCAAAAACCTTAAGGTGACATGTAGTTCCTTCACATATATATTTGCAAATGGAAGCGAATGCACCAGACATTCTGAAACAATTATGAAGTTGGGAAGTTTAGAACTCATTATGTTACAAAACCTCGAATTTATATTTGAAGAGAAATTTGAGGTGCAACCTGTTCTTCAAGATATTGAAAGATTGGTAGTAAATTCATGCTCTAGACTAAAGAATATATTTCCATCGTCAGTTATGTTTGAGAATTTACAGAAGTTGGAGGTGGGCCATTGTGCTGGATTGGAAAGTATTATGAAACCATCAACAGCTAGAAGTTTACAAAATCTTAAAGAATTATACATACATTGTTGTGGAAAGATTGAAGAAATAGTAGCAAGTGATGATGAGAATGATACTTCTGACCTAATTTTTATGAAATTGGAGTTTTTGCAACTGAGTAATTTACCAAGGCTAAGAAGTTTTTGCAAGGGAAGACATGGCTTCAAATTTCCACTGCTGAGGATGTTATTTGTAGTAGATTGTCCCGTGATGGAAACTTTCTCACATGGAGTGTTGAACGCACCAAGGCTCAGAGCAGTACATGTGAGGGAAGAAGATGAATGGCATTGGAATGGTGATGTTAACACTACTATAAAACAATTAGTAGCGAAAACGAGCTCTAAGGATGATTGTGTTTGTCCTCAAAACTTGATTGAAGGCTCAAGTAGATGA 4713 0.3847 MDGIISVAAKIAEYMVVPIGRQFGYILYYKDNLQRMETDVQKLEGTKDSVQRKVDEARNNGEEIEKFVQDWLNSVDNMVAEAKKLIDSEGHAKAQCSMGHLPNLCTRHQLSRETKKMSQDISNILADGKFDKVSYRTASQVTVSSFGRGYEALDSRTLVLDEIMLALKDPNFFIIGVYGMGGVGKTTLVEELASKAENGGSFNAVVLATISDSPDVEKIQSQIAEMLDMKFTKETRDGRARELRDRIKKKKSILVILDDIWGRLDLVEVGIPFGDDHKGCKLVVTSRDLNVLSCEMGTQKEFRLEALHEEDSWKLFEKMAGDVVQEFNIKPIAVEVAKRCAGLPLLIVTVAKALRKKKIFDWQNTLNDLERFDQEGLHNDKRINSTLELSYNFLESDELKSLFLFIGSFGVDHLHTGELFSYYWGLCLYKHSRTLTQARSKYYKLINDLKASSLLLESETEWIRIHDVVRSVAKSIASKTQPPTFGMKRYNEVKQWPGMDELRKCHQIILPWSYIYKLPEKLVCPKLELLQLENIGDYLEVPNDLFSGMRELKVVSLYGMMFTPSLPSSLHLLTKIRTLDLAGCVFEDISIVAELKSLEILSLERSDITELPKEIRQLTNLRMLNLANCSRLRFIPANLISSLTCLEELYLGNCFIEWNVKGSKEQSNSACLDELRNLSHLTTLDIMIRDASVLPRDLQVFGKLERYNIFVGDMWKWSLDWSGGASEPSRILKLADNGCSSIHLDCEFNFLLNSAEDMCLAKIHCVRNFLCELNRNGFPQLKHMCIQDIADMKYIINSMLYPTYHALPNLETLVLQNLFNLEEICHGPIPIQSFTKLRSFEVKGCDKLNNLICYSLVTDLPLLREIKISNCKMMTEIMAVQTSKVEKGMGKIIFPELRSLELECLPSLVSLCSVPLTIEKSLKVRGENYDSTQCIPVALIDQKVEMPHLELLKLSKIKSRKLWDDKLPSRSWMQNLRSLTIDGCDNIACIFSSSVAREFVNLKQLVISNCQMLEGIFVPDGKLGSLPLSQKPFSNDEVIFPNLETLVISHMEHLKFVWYNQLTPNSFGKLKELKIELCNEISNVIPSYVLDKLLNLETVTVVCCHTLEVVFETQGLKVDGGRQTKLEMQLRTLTLNHLPMLKHIWSGNPNESVKFQNLCLLQVTGCESLNYVLPLSVAKELQNLQGIYIKECGVEIIVEQDEMSDTVPILNFPELTFLSFRDLKQLQSFYRGLLTLDCPALRHVDVLHCDKLVLFKPKSINYQEIVPVDTKSLLSIEQIVQNKGELILNSKDVTMACNGHLNDELINTVTALCLRCFHDVSEKFPSGFLQRFINLKNLKVTCSSFTYIFANGSECTRHSETIMKLGSLELIMLQNLEFIFEEKFEVQPVLQDIERLVVNSCSRLKNIFPSSVMFENLQKLEVGHCAGLESIMKPSTARSLQNLKELYIHCCGKIEEIVASDDENDTSDLIFMKLEFLQLSNLPRLRSFCKGRHGFKFPLLRMLFVVDCPVMETFSHGVLNAPRLRAVHVREEDEWHWNGDVNTTIKQLVAKTSSKDDCVCPQNLIEGSSR* 1571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2404 1570 SUPERFAMILY L domain-like 464 912 - -
Mtr2g2404 1570 Gene3D Ribonuclease Inhibitor 750 911 IPR032675 -
Mtr2g2404 1570 Gene3D Ribonuclease Inhibitor 1436 1534 IPR032675 -
Mtr2g2404 1570 Gene3D Ribonuclease Inhibitor 1285 1435 IPR032675 -
Mtr2g2404 1570 Gene3D - 306 395 IPR042197 -
Mtr2g2404 1570 SUPERFAMILY L domain-like 945 1265 - -
Mtr2g2404 1570 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 159 406 IPR027417 -
Mtr2g2404 1570 SUPERFAMILY RNI-like 1309 1529 - -
Mtr2g2404 1570 PRINTS Disease resistance protein signature 174 189 - -
Mtr2g2404 1570 PRINTS Disease resistance protein signature 247 261 - -
Mtr2g2404 1570 PRINTS Disease resistance protein signature 340 354 - -
Mtr2g2404 1570 PRINTS Disease resistance protein signature 616 632 - -
Mtr2g2404 1570 Gene3D Ribonuclease Inhibitor 465 714 IPR032675 -
Mtr2g2404 1570 SMART AAA_5 171 302 IPR003593 -
Mtr2g2404 1570 Gene3D Ribonuclease Inhibitor 941 1277 IPR032675 -
Mtr2g2404 1570 PANTHER - 1 1528 - -
Mtr2g2404 1570 PANTHER RPP4C3 1 1528 - -
Mtr2g2404 1570 Pfam NB-ARC domain 167 392 IPR002182 GO:0043531
Mtr2g2404 1570 Gene3D - 138 305 IPR027417 -
Mtr2g2404 1570 Coils Coil 33 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2404 Mtr-Chr2 36187333 36198477 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2404 175 358 WRKY Transcription Factor Family AT5G45050 29.897 1.47e-08 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2404 - - mtr:MTR_2g072030 3108.16