Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2400 ATGGATGTTGTCATGGGAGTTATTATTAACTTTGCTACTAAAACTGCTGAATTTACGGTTGAAGCTATTCGTCGTCAATTTGATTACAAGGGCAACCTTACCAAGATGACAACTGATGTCCAACATTTGGAGGGAATAAAAGACATTTTGCAACACAATGTTGATGAGGCCAGAAGGAACGGGGAAGAGATTGAAAATATTGTCCAGAATTGGTTGAACACAGTGGACAACACTGTTGCAGATGCAAATGAAATTATTGACAGTGAAGGCCATGCAAAAGCTCAATGTTCTATGAGACATTTTCCCAATTTGTGCACAAGGCACCAGCTAAGTAAGAAGATGATAAAGATGATGCAAACGATTTCTGAAATCGTAGCAAAAGGAAGTTTTGATAAAATTTCCTACCGTGCTGCTTCTCAAATTACAGTTACGCCGTTCGGTAGAGGTTATGAGGCCCTTGAATCCAGAACATCAATGTTAAATGAAATTATACTGGCATTGAAGGATCCTAGCATCTTCATTGTTGGGGTGTATGGAATGGGTGGTGTGGGGAAGACAACACTGATGAAAGAGTTATCTTGGAAAGCGAAGAATGATGGGTCATTTGGTACTATTGTTATGGCTACTATAACAAGTTTACCAAATCTTGAAACAATTCGACGTCAAATTGCTGAAGCCTTGGATTTCAAGTTTAAAAAGAAAACAGAAGAAGGAAAGGCAAGAGAATTACGTGATAGGATAACCAAGGAGAAGCGTATTCTTGTTATTTTGGATGACATTTGGGGGAGACTTGATTTGACAGAACTAGGGGTTCCTTTTGGTAATGATCACAAAGGATGCAAATTGGTGGTGACATCCAGAGATCTTAATGTGTTGATTTGTGAGATGGGCACTCAAAAAGAATTTAGACTTGAAGTTTTACTTGAGGAGGATAGCTGGAAATTGTTTGAGAAGATGGCAGGTGATGTTGTTCACGAATTCAATATAAAACCAATTGCGATAAAGGTTGCCAAATGTTGTGCTGGTTTGCCCCTTTTGATAGTCACTACGGCAAAGGCTTTGAGGAAAAAACAAGTCTCTAATTGGAAGGATGCCTTAAATGAATTACAGAGATTTGATCAAGAAGGGTTGAATAAGAAAGTTTACTCTACTCTGGAATTGAGTTATAATTGTTTAGAGAGTGAAGAACTGAAGTTGCTATTCTTATTAATTGGTTCCTTTGGACTGGATTACCTCTACACTGGACCACTTTTAGTATGTTATTGGGGGTTGGGCTTATTTAGACATTCTCACAAATTTGCAGATGCAAGAATCAGATTCAACAGATTAATAAATGACCTTAAGGCATCTTCATTGTTACTTGAGTCTGAATTTGATCGGGTTAGAATTCATGATTATGTAAGAGATATGGCTAAATCAATTGCATGTAGGACTCGACCAACCTATGGGGTGAAAAGGTACACTAAAGTAAATCAATGGCCTGGGATGGATGAGCTTCAAAAATGCCATCAGATCATCCTTCCTTGGTCTTTTATTTACAAGCTTCCTGAGAAGTTGAAGTGCCCAGAGTTGAAGCTACTGCAGCTTCAGAATATAGGAGATTATTTGAAAGTCCCCGATGACTTCTTCTCTGGGATGATAGAGCTAAAGGTCATTAGTTTATATGGAATGATGTTTGCCCCGTCTCCACCAACTTCACTATGTCTCTTGACAAAACTCCAAACATTGGTTCTTACAGGATGTGTGTTAGAAGACATATCAATAGTTGCAGAGTTGAAAAGTTTAGAGATTCTCAGGCTTGAAAGATCTGATATTAAAGAGCTCCCAAAAGAAATAGGACAACTAAATAATCTTCGAATGTTGAATATAACCAACTGTTCTGCATTGAGATTCATTCCTGCAAATCTTATTTCCAGCTTAACGTGCTTGGAAGAGTTGTACATGGGGAATTGCTTTATTCAATGGGATGTCAAGGGAAGCAACGATCAAAGCAAAAATGCAAGTCTAGAAGAGCTAAGGAGTTTGTCTCATCTAACCGCTTTGGACATAATGACTCAAGATGCTTCAGTTTGGCCTAGGGACTTGCTAGTCTTTGAAAAGCTTGAAAGATACAACATATATGTTGGTGATATGTGGAAATGGTCTTTGGACTGGTCTGGAAATGCATCTGAACCTAACAGGATACTTAAGCTCAACGACAGTAGGGGTTCAAGCATTCTTTTGGATCGTGGATTTAACTCCTTGTTGAATTCAGCCGAGGACATGTGTCTTGCCAAAATACATTGTGTTAGAAATGTTCTTTATGAGCTGAATAGGGGAGGTTTTCCTCAATTAAAACATTTGCGCCTTCAAGACAGCACTGAACTTCAGTACATCATTAATTCAACGGGGTGGGTTCATCCCTATCCTGCTTTACTCAACTTAGAGACTTTGGCTCTTCAAAATCTGTTTAATCTGGAAAAAATATGCCATGGGCCAATTCCAATTCAATCTTTTGTCAAACTAAAATCTTTTGAAGTCAAAGGTTGTGACAAATTGAAGAATCTGTTGCGGTATTCCCTTGTTAGAGACCTTCCTCAACTTCGTGAAATAAAAATTGCTGATTGCCAAATGATTACAGAAATCATATCTGAGGTGGATAAAGAAATTGACAAGATTATATTCCCTGAGTTGTGTTCTCTTGAACTTGAAAGTTTGCCTCGTCTCGTTAGTTTATGTGCGCCATTGACGCAGTGCATACATGTGCCACTAATTGATCAAAAGGTTGTGATGCCCCACCTTGAACTATTGAAGTTGTCTAAGATCAATTGTGAGAAACTGTGGGATGACAAACTTCTGAGTCATTCTCGCATGCAAAACTTGAAGAGTTTGAAAATTGACAAATGTGGTAGCATGAGATACGCATTCTCATCCTCAGTTGCTAGAGAACTTGTAAACCTGAAATCTCTTAAGATTAGTAATTTCCAATTGTTGGAGGACATATTTGTCTGCAACTCTAATGACGAGGATCTACTTCCAATGTTAGAGACATTTGAAATCTCCCACATGGAACACTTGAAGTCAGTATGGCACAATCAACTAGCCCCAAATTCCTTCTGCAAATTGAAGCAACTGAAAATTCAATTCTGCAATAAATTATCAAATATAGTTCCATCTAATGTTCTTGATAAATTACAGAAGCTGGAGACAATGACTGTAACAGATTGTCCTAATCTGGAAGTTGTGTTCGAAACACAAGGTCTAAAAGCAGATGGTGGTAGACAGATAAGGCTGGATATGCAATTGAAAACTCTCACTTTGAAAAATTTACCGATGTTAAAACACATATGGAGTGGGAATCCTAATGAAAGCTTCAAGTTTCAAAACATCTTCCAATTGAAAGTTATTGAATGTAAAACCCTTAATCATGTCCTTCCTCTCTCTATGGCTAAAGAGCTTCAGCATCTCCAAGAAATTTATATTGAAGAATGTGGCATAGAGTTTATTGCAGCACATGATGAATTGGCTGACACATATCCGATACTTATTTTCCCAGAATTAACATCTTTGAGTTTTCGAGATTTGTCACAACTTAGAAGCTTCTCTCATGGATTACATACCTTGGATTGTCCTGTTTTAAGACATGTGGATGTGCTTCATTGTGACAAGCTTGTTCTATTCAAGCCAAAGTCTCTAAATTACCAAGAAATTGTTCCAGTTGATACAGTACCCCTTCTCTCAATCGAAAAGTTTGTCCCCAACACAAGGGAGCTTATTCTGAACAGAAAGGATGTCACCATGTTATGCAATGGTCAACTTAATGATGAGCTTATCTACAGAGTAACAGCTCTTCGCCTGCGATGTTTCCATGATGAGGCTGACAAATTTCCATCTGGTTTCCTCCAAAAGTTTATCAATCTCATAAAGCTTAAGGTGACATGTAGTTCCTTCACATACATTTTCTCGAGTGGAAGCAAATGCGCTGGACATTCTGAAACAACTATGAAGTTGAGAAATTTAGTACTTGTTCAGTTAGATAACCTCGAGTTTATATGTGAAGAGAAATCTGAGGTGCAATCAGTTATTCAAAATATTGAAACTTTGAGTGTAACTAGATGTTCTAGGCTGAAGAACATCATTCCATCCTCGGCTTTGTTTGAGAATTTAGAGCAGTTGGAAGTGTTTAATTGTGGTGGACTGGAATATATTATGAAATCATCAACAATTACCAATTTACCAAAACTTCGAAAATTATGCATAGATTTTTGTGAAAAGATAGAAGTAATCGTTGCAAGTGACGATGAGAATGATGCTTCGGAGTTATCATTTATGAAATTGGGGTATCTGCGATTGAATAACTTACCAAGGCTAAGAAGTTTTTGTAAAGGAAGACATGACTTCAAATTTCCACTATTGAGGACGTTATTTGTAATAAACTGTCCCATGATGGAAACTTTCTCAAATGGTATGTTGAACGCACCAAAGCTCATAGAAGTACGTGTAACACCGCAAGATGATCGTTGGAATGGTGACCTTAACACTACTATAAAAAAAATTGCAGTGAAAAGGAACTCTACGGATGATTAG 4566 0.3763 MDVVMGVIINFATKTAEFTVEAIRRQFDYKGNLTKMTTDVQHLEGIKDILQHNVDEARRNGEEIENIVQNWLNTVDNTVADANEIIDSEGHAKAQCSMRHFPNLCTRHQLSKKMIKMMQTISEIVAKGSFDKISYRAASQITVTPFGRGYEALESRTSMLNEIILALKDPSIFIVGVYGMGGVGKTTLMKELSWKAKNDGSFGTIVMATITSLPNLETIRRQIAEALDFKFKKKTEEGKARELRDRITKEKRILVILDDIWGRLDLTELGVPFGNDHKGCKLVVTSRDLNVLICEMGTQKEFRLEVLLEEDSWKLFEKMAGDVVHEFNIKPIAIKVAKCCAGLPLLIVTTAKALRKKQVSNWKDALNELQRFDQEGLNKKVYSTLELSYNCLESEELKLLFLLIGSFGLDYLYTGPLLVCYWGLGLFRHSHKFADARIRFNRLINDLKASSLLLESEFDRVRIHDYVRDMAKSIACRTRPTYGVKRYTKVNQWPGMDELQKCHQIILPWSFIYKLPEKLKCPELKLLQLQNIGDYLKVPDDFFSGMIELKVISLYGMMFAPSPPTSLCLLTKLQTLVLTGCVLEDISIVAELKSLEILRLERSDIKELPKEIGQLNNLRMLNITNCSALRFIPANLISSLTCLEELYMGNCFIQWDVKGSNDQSKNASLEELRSLSHLTALDIMTQDASVWPRDLLVFEKLERYNIYVGDMWKWSLDWSGNASEPNRILKLNDSRGSSILLDRGFNSLLNSAEDMCLAKIHCVRNVLYELNRGGFPQLKHLRLQDSTELQYIINSTGWVHPYPALLNLETLALQNLFNLEKICHGPIPIQSFVKLKSFEVKGCDKLKNLLRYSLVRDLPQLREIKIADCQMITEIISEVDKEIDKIIFPELCSLELESLPRLVSLCAPLTQCIHVPLIDQKVVMPHLELLKLSKINCEKLWDDKLLSHSRMQNLKSLKIDKCGSMRYAFSSSVARELVNLKSLKISNFQLLEDIFVCNSNDEDLLPMLETFEISHMEHLKSVWHNQLAPNSFCKLKQLKIQFCNKLSNIVPSNVLDKLQKLETMTVTDCPNLEVVFETQGLKADGGRQIRLDMQLKTLTLKNLPMLKHIWSGNPNESFKFQNIFQLKVIECKTLNHVLPLSMAKELQHLQEIYIEECGIEFIAAHDELADTYPILIFPELTSLSFRDLSQLRSFSHGLHTLDCPVLRHVDVLHCDKLVLFKPKSLNYQEIVPVDTVPLLSIEKFVPNTRELILNRKDVTMLCNGQLNDELIYRVTALRLRCFHDEADKFPSGFLQKFINLIKLKVTCSSFTYIFSSGSKCAGHSETTMKLRNLVLVQLDNLEFICEEKSEVQSVIQNIETLSVTRCSRLKNIIPSSALFENLEQLEVFNCGGLEYIMKSSTITNLPKLRKLCIDFCEKIEVIVASDDENDASELSFMKLGYLRLNNLPRLRSFCKGRHDFKFPLLRTLFVINCPMMETFSNGMLNAPKLIEVRVTPQDDRWNGDLNTTIKKIAVKRNSTDD* 1522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2400 1521 Gene3D - 141 304 IPR027417 -
Mtr2g2400 1521 Gene3D Ribonuclease Inhibitor 921 1083 IPR032675 -
Mtr2g2400 1521 Gene3D Ribonuclease Inhibitor 1241 1500 IPR032675 -
Mtr2g2400 1521 PANTHER RPP4C3 1094 1206 - -
Mtr2g2400 1521 PANTHER RPP4C3 1 1094 - -
Mtr2g2400 1521 PANTHER RPP4C3 1335 1494 - -
Mtr2g2400 1521 Coils Coil 40 67 - -
Mtr2g2400 1521 SUPERFAMILY L domain-like 1032 1228 - -
Mtr2g2400 1521 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 403 IPR027417 -
Mtr2g2400 1521 SUPERFAMILY RNI-like 1273 1492 - -
Mtr2g2400 1521 PRINTS Disease resistance protein signature 174 189 - -
Mtr2g2400 1521 PRINTS Disease resistance protein signature 247 261 - -
Mtr2g2400 1521 PRINTS Disease resistance protein signature 340 354 - -
Mtr2g2400 1521 PRINTS Disease resistance protein signature 613 629 - -
Mtr2g2400 1521 SUPERFAMILY L domain-like 462 1070 - -
Mtr2g2400 1521 Gene3D Ribonuclease Inhibitor 510 917 IPR032675 -
Mtr2g2400 1521 PANTHER - 1335 1494 - -
Mtr2g2400 1521 PANTHER - 1 1094 - -
Mtr2g2400 1521 PANTHER - 1094 1206 - -
Mtr2g2400 1521 Gene3D - 306 393 IPR042197 -
Mtr2g2400 1521 Pfam NB-ARC domain 158 390 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2400 Mtr-Chr2 36137002 36142742 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2400 172 490 WRKY Transcription Factor Family AT5G45050 28.783 1.57e-09 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2400 - - mtr:MTR_2g071870 2811.17