Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2393 ATGGATGTTATTATTTCAATTGCTGCTAAATTTGCTGAAATTATGGTTGCACCTATTGGACGTCAATTTCGTTACATACTCTACTACAAGGACTACCTTAAAAAGATGAAAACTGATGTCCAAAAGCTGGAGGGAATAAAAAACAGTGTGCAACACACTGTTGATGAGGCTAGAAGGAACGGAGAAGAGATTGAAAATGTTGTCCAAAATTGGATGAGCAAAGTGGACAACACTTTTGCGGAGGCAAATAAACTAATTGACAATGAAGACCTTGCAATAGGTCAACGTTCTATGCGAAACTTTCCCAATCTGTGCACAAGGCATCAGCTGAGCAAGAAGATTAAAAAGATGATACAAAAGATTTCTGAAGTCATAGTAGAAGGAAAATTTGACAGAATATCTTACCGTGCTTCTTTGCAAGTAACAATCACACCATTCGGTAGAGGTTATGAGGCCCTGCACTCAAGAACATCAATGCTGAATGAGATTATGCTTGCATTGAAGGATGCTAACATCTTCATCATTGGTGTGTATGGGATGGGTGGAGTGGGGAAAACGACATTAGTGAAAGAATTAGCTTGGCAAGCTGAGAATGATGAGTCATTTAGTGCTGTAGTTATGGCTACTATAACTGATTCTCCAGATGGGATAGAAATTCAAGGCCAAATTGCTGATGCCTTGGATCTGAAATTTAACAAGGAGACCAAAGAAGGAAGAGCAAGAGAATTGCGTGAAAGGATAACCAAGGAGAAGAGTATTCTTGTTGTGCTAGATGACATTTGGAGGAAAATTGAATTGACAGAACTGGGGGTTCCATTTGGTAATGATCATAAAGGATGTAAGGTGGTGGTGACATCTAGAGATCTAAATTTGTTACTTGAAGTTTTAAATGAGGAGGATAGTTGGCAATTGTTTAAGAAAATGGCAGGTGATGTTGTTCAAGATTTCAATATAAAACCAATTGCAGTAGAAGTGGCCAGACGTTGTGCTGGTTTTCCGCTTTTGATTGTTACTGTGGCAAAGGCTTTGAGGAAGAAAAAAATCTTTGATTGGAAAAGCACGTTAAATGAGTTAGAGAGATTTGATCAAGAAGGGCTGCATAAGAAAATATATTCTGCTTTGGAATTGAGTTATAATTGCCTAGAAAGTGATGAGCTAAAGTCACTGTTCTTATTCATAGGTTCGTTTGGACTAGATTACCTCCACACCGGAGAACTGTTTTCAAGCTATTGGGGGATGGGCTTATATAGACACTCTCACACATTGACAGATGCAAGAACCAGATACTGCAAATTAATAAATGACCTAAAGGCTTGCTCACTGTTACTTGAGTCTGAAGCTGAACTAATTAGAATTCATGATGTTGTTAGAGATGTGGCCAAATCAATCGCATCTAGGACTCGACCAACCTATGGTGTGCAAAGGTTCGCTTTGATAAAACAGTGGCCAGAGATAGATCAGCTCCAAAAATGCCATCAGATCAGTCTGCATTGGTCTTATATTTACAATCTTCCTGAGAAGATGGAGTGCCCAGAGTTGACTCTACTTATACTTGAAAATATAGGTGAGTATTTAAAAATCTCCGATGACTTCTTCTCTGGGATGAGAGAGCTATCGGTCGTTAGTTTATATGGAATGATGTTTGCTCCTTCTCCACCACCATCTCTTCGTATCTTGACAAAAATCCAAACGCTGGAGCTGGCTGGATGTGTGTTAGAAGACATATCAATAGTTGCAGAGCTGAAGAGTTTAGAGATTCTCAACCTTGAAAGATCTGATATTAAAGAACTCCCCCAAGAAATAGGACAACTAACTAATCTTCGAATGCTGAATTTAGCCAATTGCTCTGGGCTGAGATTCATTCCTGCAAACCTTATTTCGAGCTTAACATGCTTGGAAGAGTTATACATGGGGAATTGCTTTATCAAGTGGAATATAAAGGGAAGCAAAGATCAAAGTAATCATGCAAGTCTAGAAGAGATTTGGAATTTGTCACATCTAACATCATTAGACATAATGATTCAGGATGCTTCAATTTGGCCGAGGGATTTGCAGGTCTTTGAAAAGCTTGATAGATACAACATATTTATTGGTGATATGTGGAAATGGTCTTTGGAATGGTCTGGATGTGCTTCTGAATCTTCAAGAATACTTAAGCTCGCGGACAGTAGGAGTTCAAACATTCTTTCTGATCATGGGTCTACCTTCTTGTTAAATTCAGCAGAGGACATGTGCCTTGCCAAAATTCAATGTGTTAGAAATGTCCTTTATGAACTGAATAGGGAAGGTTTTCCACAATTAAAGCATTTGCGCATTCAAGATAGTACTGATCTAAAGCACATCATTAACTCAATTGACTGGATTCATCCTTATCCTGCTTTACCCAACTTAGAGAGTTTAGCTCTTCAAAATCTATTTAATCTTGAAGAAATATGTCATGGCCCAATTCCAATTCAATCTTTTACCGAACTAAAATCTTTTGAAGTCAAAGGCTGTGACAAGTTGAAGAATCTTTTATGGTACTCTTTGGTTAGAAACCTTCCTCGCCTTCTCGAAATAAAAATTTCTGATTGCAAAATGATTACAGAAATCATAGCTGAGCAAACATATGATGCTGATAAAGAAATCGATAAGATTATGTTCCATAAGTTGCGTTCTATTGTACTTGAGAACTTGCCTAGTCTCATTAGTTTCTGTTCCATGTTATTGACAGTTGATATCAAAAAGTGTGGTGAAGATTATCAAGGTACACAATGCTTACCTGTGGCCCTAATGGATGAAAAGGTTGTGATGCCCCACCTTGAACTCTTGAAGCTGTCTAAGATCAATTCTAGGAAACTGTGGGATGACAAACTTTCGGGGCATTCTTGCATTCAAAACTTGAGGAGTTTGACAATTGACAAATGTGGTAGCATAGCCTATGCATTCTCATCCTCAATGGCTGGAGAGCTTGTAAACCTGCAGCATCTTGAGATTAGTAATTGCCAAATGTTGGAGCAGATAATTGTCTCAGATGGAAAGTTTGACAATCTTCCTTTATCTCAGGAACCATTCTATAATGATGTGGGCATCTATTAA 3078 0.3821 MDVIISIAAKFAEIMVAPIGRQFRYILYYKDYLKKMKTDVQKLEGIKNSVQHTVDEARRNGEEIENVVQNWMSKVDNTFAEANKLIDNEDLAIGQRSMRNFPNLCTRHQLSKKIKKMIQKISEVIVEGKFDRISYRASLQVTITPFGRGYEALHSRTSMLNEIMLALKDANIFIIGVYGMGGVGKTTLVKELAWQAENDESFSAVVMATITDSPDGIEIQGQIADALDLKFNKETKEGRARELRERITKEKSILVVLDDIWRKIELTELGVPFGNDHKGCKVVVTSRDLNLLLEVLNEEDSWQLFKKMAGDVVQDFNIKPIAVEVARRCAGFPLLIVTVAKALRKKKIFDWKSTLNELERFDQEGLHKKIYSALELSYNCLESDELKSLFLFIGSFGLDYLHTGELFSSYWGMGLYRHSHTLTDARTRYCKLINDLKACSLLLESEAELIRIHDVVRDVAKSIASRTRPTYGVQRFALIKQWPEIDQLQKCHQISLHWSYIYNLPEKMECPELTLLILENIGEYLKISDDFFSGMRELSVVSLYGMMFAPSPPPSLRILTKIQTLELAGCVLEDISIVAELKSLEILNLERSDIKELPQEIGQLTNLRMLNLANCSGLRFIPANLISSLTCLEELYMGNCFIKWNIKGSKDQSNHASLEEIWNLSHLTSLDIMIQDASIWPRDLQVFEKLDRYNIFIGDMWKWSLEWSGCASESSRILKLADSRSSNILSDHGSTFLLNSAEDMCLAKIQCVRNVLYELNREGFPQLKHLRIQDSTDLKHIINSIDWIHPYPALPNLESLALQNLFNLEEICHGPIPIQSFTELKSFEVKGCDKLKNLLWYSLVRNLPRLLEIKISDCKMITEIIAEQTYDADKEIDKIMFHKLRSIVLENLPSLISFCSMLLTVDIKKCGEDYQGTQCLPVALMDEKVVMPHLELLKLSKINSRKLWDDKLSGHSCIQNLRSLTIDKCGSIAYAFSSSMAGELVNLQHLEISNCQMLEQIIVSDGKFDNLPLSQEPFYNDVGIY* 1026
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2393 1025 SUPERFAMILY RNI-like 882 1005 - -
Mtr2g2393 1025 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 393 IPR027417 -
Mtr2g2393 1025 Coils Coil 40 60 - -
Mtr2g2393 1025 CDD AAA 160 286 - -
Mtr2g2393 1025 PANTHER - 1 1014 - -
Mtr2g2393 1025 Gene3D Ribonuclease Inhibitor 879 1013 IPR032675 -
Mtr2g2393 1025 PRINTS Disease resistance protein signature 174 189 - -
Mtr2g2393 1025 PRINTS Disease resistance protein signature 247 261 - -
Mtr2g2393 1025 PRINTS Disease resistance protein signature 329 343 - -
Mtr2g2393 1025 PRINTS Disease resistance protein signature 602 618 - -
Mtr2g2393 1025 Gene3D Ribonuclease Inhibitor 480 878 IPR032675 -
Mtr2g2393 1025 PANTHER RPP4C3 1 1014 - -
Mtr2g2393 1025 Gene3D - 299 382 IPR042197 -
Mtr2g2393 1025 Gene3D - 144 298 IPR027417 -
Mtr2g2393 1025 SUPERFAMILY L domain-like 451 902 - -
Mtr2g2393 1025 Pfam NB-ARC domain 159 379 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2393 Mtr-Chr2 36094913 36100923 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2393 162 470 WRKY Transcription Factor Family AT5G45050 28.313 1.42e-10 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2393 - - mtr:MTR_2g072150 1440.63