Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2390 ATGGATGTTATTATTTCAATTGCTGCTAAAATTGCTGAAATTATGGTTGCACCTATTGGACGTCAATTTCGTTACATACTCTACTACAAGGACTACCTTAAAAAGATGAAAACTGATGTCCAGAAGTTGGAGGGAATTAAAAACAGTGTGCAACACACTGTTGATGAGGCTAGAAGGAACGGAGAAGAGATTGAAAATGTTGTCCAAAATTGGATGAGCAAAGTGGACAACACTTTTGCGGAGGCAAATAAACTAATTGACAATGAAGACCTTGCAATAGGTCAACGTTCTATGCGAAACTTTCCCAATCTGCGCACAAGGCATCAGCTGAGCAAGAAGATTAAAAAGATGATACAAAAGATTTCTGAAGTCATAGTAGAAGGAAAATTTGACAGAATATCTTACCGTGCTTCTTTGCAAGTAACAATCACACCATTCGGTAGAGGTTATGAGGCCCTGCACTCAAGAACATCAATGCTGAATGAGATTATGCTTGCATTGAAGGATCCTAACATCTTCATTATTGGTGTGTATGGGATGGGTGGAGTGGGGAAAACGACATTAGTGAAAGAATTAGCTTGGCAAGCTGAGAATGATGAGTCATTTAGTGCTGTAGTTATGGCTACTATAACTGGTTCTCCAGATGTGATAGAAATTCAAGGCCAAATTGCTGATGCCTTGGATCTGAAATTTAACAAGGAGACCAAAGAAGGAAGAGCAAGAGAATTGCGTGAAAGGATAACCAAGGAGAAGAGTATTCTTGTTGTGCTGGATGACATTTGGAGGAGACTTGAATCGACAGAACTGGGGGTTCCATTTGGTAATGATCATAAAGGATGTAAGGTGGTGGTGACATCTAGAGATATGAATTTGTTGAGCTGTGAGTTTGGTACTCAGAGAGAATTTAGACTTGAAGTTTTAAATGAGGAGGATAGTTGGCAATTGTTTAAGAAAATGGCAGGTGATGTTGTTCAAGATTTCAATATAAAACCAATTGTAGTAAAAGTGGCCAGACGTTGTGCTGGATTTCCGCTTTTGATTGTTACTGTGGCAAAGGCTTTTAGGAAGAAAAAAATCTTTGATTGGAAAAGCACATTAAATGAGTTAGAGAGATTTGATCAAGAAGGGCTGCATAAGAAAATATATTCTGCTTTGGAATTGAGTTATAATTGCCTAGAAAGTGATGAGCTAAAGTTTTCTTTGATGGCGTCCTTGTCTATTGAGAATCAAGCGGTGATTGATAAGTTGCAAGTGGTATGCGAGTTTCCAGAAGTTTTCCCTGATGAAATTCTTGATGTGCCGCCAGAGAGGGAAGTAGAATTTTCTATTGATCTTATTCCGGGTACGAAGCCTATTTCTATGGCACCTTACCATATGTCAGCTTCCGAATTAGCTGAGTTGAAAAAACAGTTAGAAGATTTGCTTGATAAAAAATTTGTAAGACCGAGTGTATTGCCTTGGGGAGCACCGGTGTTATTGGTTAAGAAGAAAGATGGTAGCATGAGGTTATGTATAGATTGCTAA 1524 0.3852 MDVIISIAAKIAEIMVAPIGRQFRYILYYKDYLKKMKTDVQKLEGIKNSVQHTVDEARRNGEEIENVVQNWMSKVDNTFAEANKLIDNEDLAIGQRSMRNFPNLRTRHQLSKKIKKMIQKISEVIVEGKFDRISYRASLQVTITPFGRGYEALHSRTSMLNEIMLALKDPNIFIIGVYGMGGVGKTTLVKELAWQAENDESFSAVVMATITGSPDVIEIQGQIADALDLKFNKETKEGRARELRERITKEKSILVVLDDIWRRLESTELGVPFGNDHKGCKVVVTSRDMNLLSCEFGTQREFRLEVLNEEDSWQLFKKMAGDVVQDFNIKPIVVKVARRCAGFPLLIVTVAKAFRKKKIFDWKSTLNELERFDQEGLHKKIYSALELSYNCLESDELKFSLMASLSIENQAVIDKLQVVCEFPEVFPDEILDVPPEREVEFSIDLIPGTKPISMAPYHMSASELAELKKQLEDLLDKKFVRPSVLPWGAPVLLVKKKDGSMRLCIDC* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2390 507 SMART AAA_5 171 306 IPR003593 -
Mtr2g2390 507 PANTHER - 3 398 - -
Mtr2g2390 507 Gene3D - 306 393 IPR042197 -
Mtr2g2390 507 Gene3D HIV Type 1 Reverse Transcriptase, subunit A, domain 1 431 507 - -
Mtr2g2390 507 Coils Coil 40 60 - -
Mtr2g2390 507 CDD AAA 160 286 - -
Mtr2g2390 507 Gene3D - 144 300 IPR027417 -
Mtr2g2390 507 PANTHER PHOSPHATASE, PUTATIVE-RELATED 3 398 - -
Mtr2g2390 507 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 395 IPR027417 -
Mtr2g2390 507 Coils Coil 457 477 - -
Mtr2g2390 507 SUPERFAMILY DNA/RNA polymerases 418 506 IPR043502 -
Mtr2g2390 507 Pfam NB-ARC domain 159 390 IPR002182 GO:0043531
Mtr2g2390 507 PRINTS Disease resistance protein signature 174 189 - -
Mtr2g2390 507 PRINTS Disease resistance protein signature 247 261 - -
Mtr2g2390 507 PRINTS Disease resistance protein signature 340 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2390 Mtr-Chr2 36072805 36079029 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2390 162 358 WRKY Transcription Factor Family AT5G45050 28.986 7.02e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2390 - - mtr:MTR_2g071820 978.008