Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2341 ATGACCTGTTTCCCTTTCTCGTTCAGTAAGACACCGTCTTCTTCAAGACAGCATCCAGACAACGATGAAGATATCTCAAGCATTCATGATGTTAAAATCTATACCTTCAAAGAACTAAGGAATGCCACCGATAACTTTAGTCCGGCCAATAAAATCGGAGAGGGTGGTTTTGGTTCTGTCTACATGGGACGACTTAAAGGTGGAAAACTCGCTGCTATAAAAGTTCTTTCGGCTGAATCAAGACAAGGGGTGAAAGAGTTCTTGACAGAGATTAATGTGATCTCCGCAGTAGAGCATGAAAATTTGGTTAAGTTATATGGTTGTTGTGTTGAAAAAAATAACAGGATATTAGTCTACAATTACCTTGAGAATAACAGTCTTTCACGAACACTTCTAGGTGGAGGTCACAATAGTGATAGTATCTACTTTGATTGGCGAACACGGTGTAGAATATGTATTGGCGTTGCACGTGGGCTTGCCTTTCTTCATGAAGAAGTCAGGCCTCCTATCATTCATAGGGATATAAAAGCTAGCAATATTCTCCTTGACAAAGACCTTACACCGAAGATTTCTGATTTTGGTCTTGCAAAGCTTATTCCAGCAAATGCGACTCATGTCAGCACACGTGTGGCAGGAACACTAGGTTATTTGGCACCGGAGTATGCAATAGGGGGGAGACTCACACGAAAGGCAGACATTTACAGTTTTGGTGTTCTCCTTGTAGAGATAGTCAGCGGAAGATGTAACACAAATTCGCGACTGCCAATAGAAGAACAATTCATTCTAGAGAGGACATGGGATCTTTACGAGCGAAAGGAATTAGTTGGACTAGTAGATACATCGCTAAACGGGGAATTTGATGCCGAGCAGGCATGTAAATTTCTGAAGATTGGCCTTCTTTGCACTCAGGAATCTCCTAAGAGCCGACCGTCCATGTCTACTGTGGTCAAGATGCTTACAGGAGAAATGAAAGTCGATGACAGTATGATGACAAAACCTGCCTTAATTTCTGATTTTATGGACCTAAAAGTTAGACATAAACAAGAAAGTATAACTGATATGAAGACTTCATCTTCATATAATACTTCCTCGGCCTCGGAGCATCAGGACACTACCATTATATCATCAGCTGCCACTTCAACCTTCACTACACAATATGATCACAGCATGTAA 1173 0.4118 MTCFPFSFSKTPSSSRQHPDNDEDISSIHDVKIYTFKELRNATDNFSPANKIGEGGFGSVYMGRLKGGKLAAIKVLSAESRQGVKEFLTEINVISAVEHENLVKLYGCCVEKNNRILVYNYLENNSLSRTLLGGGHNSDSIYFDWRTRCRICIGVARGLAFLHEEVRPPIIHRDIKASNILLDKDLTPKISDFGLAKLIPANATHVSTRVAGTLGYLAPEYAIGGRLTRKADIYSFGVLLVEIVSGRCNTNSRLPIEEQFILERTWDLYERKELVGLVDTSLNGEFDAEQACKFLKIGLLCTQESPKSRPSMSTVVKMLTGEMKVDDSMMTKPALISDFMDLKVRHKQESITDMKTSSSYNTSSASEHQDTTIISSAATSTFTTQYDHSM* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2341 390 PANTHER RECEPTOR-LIKE KINASE 2 379 - -
Mtr2g2341 390 Gene3D Phosphorylase Kinase; domain 1 16 121 - -
Mtr2g2341 390 SMART serkin_6 46 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g2341 390 ProSiteProfiles Protein kinase domain profile. 46 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g2341 390 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 2 379 - -
Mtr2g2341 390 MobiDBLite consensus disorder prediction 1 15 - -
Mtr2g2341 390 Gene3D Transferase(Phosphotransferase) domain 1 122 335 - -
Mtr2g2341 390 ProSitePatterns Protein kinases ATP-binding region signature. 52 74 IPR017441 GO:0005524
Mtr2g2341 390 SUPERFAMILY Protein kinase-like (PK-like) 23 319 IPR011009 -
Mtr2g2341 390 CDD STKc_IRAK 52 321 - -
Mtr2g2341 390 ProSitePatterns Serine/Threonine protein kinases active-site signature. 170 182 IPR008271 GO:0004672|GO:0006468
Mtr2g2341 390 Pfam Protein kinase domain 49 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g2341 390 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2341 Mtr-Chr2 35394758 35398351 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2341 34 363 Receptor kinase-like Gene Family AT1G07650 52.121 3.99e-109 336
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr2g2341 Pkinase 5.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2341 - - gmx:100782320 607.831