LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr2g2284	ATGAATTATTATTGTATTATATGCAGCTTAAAATCATTGGATCAAGGGGTGAGTGTCAGTGTTGGTGAGTCACTTACAGCTGGCAATGGGACAACCCGATGGCTCTCTCCTTCAAGAGATTTTGCATTTGGGTTTTACCAACTTCCTAATGCACTTTTCTTGCTAGCTATTTGGTATGACAAGATACAAAATGATGCCATCATTTGGTATGCAAATGGAGACAACCCTGCACCCAAGGGATCAAGATTGGTATTAAATGATTTTCAAGGTTTGGTTCTCACCAACCCTCAAGGTTTAGAGTTATGGAGATCAGATTTCACATCAGGTAAAATTTCTAATGGTCTAATGGATGATGATGGAAACTTTCATTTGCGAGACAAAAATAATGCGACAATATGGGACAGTTTCAGTCATCCTACGGATACATTAGTTCCTAATCAAGTAATGGAGTTAAATGGGAATCTTTTTTCACGGCAAGGAGCGTTAAACTTCTCACACGGAAGGTTCAAATTTCATCTACAAGAGGATGGAAATCTTGTACTTAACGTTATAAATCTGCCAAGCAACTATAGTTATGATCCTTACTACACATCTGGCACAAGTGATGATGAGAATCAAACAAATGCTGGCCAACGTTTGATATTTGACAAATCAGGTTTCTTATACATAGAGAAAATAGGAGGGAATAACTTTTCTATTTTCAACCAGAATGTGAGATTCTCAACTGATGAGTTCTACTACAAAGCAACAATTAATTATGATGGAGTTTTCACCATATCAGTTTACCCTAAAGATCCAAAAAGAGGACAAAGTTGGGTCATTGCAAAGACTATACCAGAAAACATATGCTTGTACTATACATCCATATATGGTGAAGGTGTATGTGGGTTTAATAGTATGTGCACCATTACAAATGACCAAAGGCCAAATTGTACCTGCCCAGACGAATATTCTCCGATTGATTCAAATAACATGTATGCTGGTTGCATACCAAATTTTCAAGTTATCTGTCAAGCAGGTGGGAATTTGAGTTCACAAGATAATCTATATACAATGAAGGAGTTACCAAATACTGATTGGCCTGGATCTGATTATGAAAAAATATCTCCATCTAATTTACAAGAATGTAAGGAATCATGTTTGCAAGATTGCTTATGTGTTTTGGTTCATTTTGACCAAGTCCGAAGTTCCTGCTGGAAAAAGAAGCTCCCACTATCTTATGGTAGAAATGATCCGGCGGTAAATGGTATTTCAATCATGAAATTGATGAAAAGTGATCATTTGTCCTCCTTCTCAAAAGTGAAGAAAGATCATGATACTTTGGTCATTGTGATTTCAGTTCTTTTGGGAAGCTCTATATTTGTCATTTTAACATTGCTCGGGGTGATATTTTTTGGGTTCCCCTACAACCGGAAGAAGATCAAAAGTGGTAGAAACAACGAAAGTTTTGTTGACAATAACTTGCGAAGGTTTAGCTTCAAGGAAATTGTTGAAGCAACAAGAAACTTTAAAGAAGAATTAGGAAGAGGGTCTTGTAGCATCGTCTACAAAGGAACAATAGAGATTATGATCAATGTGGCAGTTAAGAAACTAGATAAGTTGATTCAAGATAGTGATAAGGAATTTAAGACTGAAATGAGTGTGATAGCCCAAACCCTTCATAGGAATCTTGTTCGTCTTCTTGGATACTGCAATGAGGGACAACATCGGATTTTGGTATACGAGTTCATGAGTAATGGTACTTTAGCGAGCTTTCTTTTCACCCCATTAAAACCAGATTGGAACCAACGAGTCCACATTATCCTGGGGATTGCAAGAGGTCTTGTTTACTTGCATGAGGGATGTTGCACCCAAATCATCCATTGTGATATAAAGCCACAAAATATACTTCTAGATGATCAATACAATGCAAGGATTTCAGATTTTGGATTATCAAAGCTATTGTTGATTAATCAAAGCCACACTGAAACTGGAATTAGAGGAACCAAAGGGTATGTTGCACCAGATTGGTTTAGGAGTGCACCAATCACTGCAAAGGTTGATACTTATAGTTTTGGTGTATTGTTGTTAGAGATCATTTGTTGTAGGAAAAATGTAGAGAAAGAAATTTTCACTGAAGAACAAGGGATTTTAACTGATTGGGCTTATGATTGCTATAAGACTAAAAGACTTGACGGTCTTCTAGAAAATGATAATGAGGCTGGCAATGACATGATGTGCTTGGAAAAGTTTGTGATGATTGCTATTTGGTGCATTCAAGAAGATCCTTCTCTTAGGCCAACAATGAAGAATGTTTTACTGATGTTAGAAGGAATTGTTGAAGTTGCAGTTCCCCCAAGTCCCTATCTATATGGATCTAATTAG	2364	0.368	MNYYCIICSLKSLDQGVSVSVGESLTAGNGTTRWLSPSRDFAFGFYQLPNALFLLAIWYDKIQNDAIIWYANGDNPAPKGSRLVLNDFQGLVLTNPQGLELWRSDFTSGKISNGLMDDDGNFHLRDKNNATIWDSFSHPTDTLVPNQVMELNGNLFSRQGALNFSHGRFKFHLQEDGNLVLNVINLPSNYSYDPYYTSGTSDDENQTNAGQRLIFDKSGFLYIEKIGGNNFSIFNQNVRFSTDEFYYKATINYDGVFTISVYPKDPKRGQSWVIAKTIPENICLYYTSIYGEGVCGFNSMCTITNDQRPNCTCPDEYSPIDSNNMYAGCIPNFQVICQAGGNLSSQDNLYTMKELPNTDWPGSDYEKISPSNLQECKESCLQDCLCVLVHFDQVRSSCWKKKLPLSYGRNDPAVNGISIMKLMKSDHLSSFSKVKKDHDTLVIVISVLLGSSIFVILTLLGVIFFGFPYNRKKIKSGRNNESFVDNNLRRFSFKEIVEATRNFKEELGRGSCSIVYKGTIEIMINVAVKKLDKLIQDSDKEFKTEMSVIAQTLHRNLVRLLGYCNEGQHRILVYEFMSNGTLASFLFTPLKPDWNQRVHIILGIARGLVYLHEGCCTQIIHCDIKPQNILLDDQYNARISDFGLSKLLLINQSHTETGIRGTKGYVAPDWFRSAPITAKVDTYSFGVLLLEIICCRKNVEKEIFTEEQGILTDWAYDCYKTKRLDGLLENDNEAGNDMMCLEKFVMIAIWCIQEDPSLRPTMKNVLLMLEGIVEVAVPPSPYLYGSN*	788

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr2g2284	787	Gene3D	Phosphorylase Kinase; domain 1	467	576	-	-
	Mtr2g2284	787	Gene3D	-	15	138	IPR036426	-
	Mtr2g2284	787	CDD	B_lectin	17	139	IPR001480	-
	Mtr2g2284	787	ProSiteProfiles	Protein kinase domain profile.	501	783	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mtr2g2284	787	PIRSF	SRK	1	786	IPR024171	GO:0004674
	Mtr2g2284	787	PANTHER	MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN	12	786	-	-
	Mtr2g2284	787	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	619	631	IPR008271	GO:0004672\|GO:0006468
	Mtr2g2284	787	Gene3D	-	139	282	-	-
	Mtr2g2284	787	Gene3D	Hepatocyte Growth Factor	349	420	-	-
	Mtr2g2284	787	Pfam	Protein kinase domain	503	766	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mtr2g2284	787	SUPERFAMILY	Protein kinase-like (PK-like)	479	778	IPR011009	-
	Mtr2g2284	787	Pfam	D-mannose binding lectin	67	152	IPR001480	-
	Mtr2g2284	787	SMART	blect_4	16	139	IPR001480	-
	Mtr2g2284	787	SMART	serkin_6	501	769	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mtr2g2284	787	PANTHER	G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5	12	786	-	-
	Mtr2g2284	787	Gene3D	Transferase(Phosphotransferase) domain 1	577	777	-	-
	Mtr2g2284	787	ProSiteProfiles	Bulb-type lectin domain profile.	10	137	IPR001480	-
	Mtr2g2284	787	SUPERFAMILY	alpha-D-mannose-specific plant lectins	53	200	IPR036426	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr2g2284	Mtr-Chr2	34540491	34542873	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mtr2g2284	443	774	Receptor kinase-like Gene Family	AT5G45780	39.706	2.26e-72	245

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_SD-2b	Mtr2g2284		Pkinase	7.1e-46	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr2g2284	-		-	mtr:MTR_2g067980	1384.78