Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2281 ATGTCTCCTACCACATGGAGTGGTCATTTTTGGGGCCGAACGGTCTGCAAAACGGATTCAGCAACAGAAAACTTCTCATGTGTTACCGGAGATTGTGGTACCGGGAAGGTGGAATGCGATATAAACAAAGGCATGTCGCCTGCAACGCGCGCTGAATTTCGTTTAGGAGACGATGGACTTGATTTTTATACCGTTAATGTCGTAGAAGGTTTCAACATCCCCATAGCAGTGACTCCTATGAGTGCTTCTGGTGAGAATCTCAATTGCAGCAGCGCGGGTTGCCCTGCAAATATAAATACTATGTGTCCGACAGAGCTTAAGGTGATGGAAAATGAGGATGTAGTCGCTTGTCAAGGAGCTTGCTCTACAGATAATTTGGAAAATTTTTGTTGTCTTAAGAGTAACTTTTCAACAAGTGAAACTTGTGATCCAAGTTCTTATGCTCTCACATTCAAGACAGCATGTCCTCATGCCTATAGCTACCCTCACAACAAGGAAAACACATTCAGTTGTTCATCTAAACTTTACAAAATCATCTTTTGCCCAGCTTCCAGCGATGATGACAGTATGGGATCATTGGGTGGAAGTGTGAGTCTAGGTGACTCACTCACTGCTGGAAATGGGACAACTCGTTGGCTCTCTCCTTCGGGAGATTTCGCATTTGGATTTTACCAACTTCCAAATCAGCTTTTCTTGCTAGCTATATGGTATGTCAAAATACAAACTGATTCCATCATTTGGTATGCAAATGGTGACAACCCTGTTCCTAAGGGATCAACATTGGTATTAAATGATTCTCATGGGTTGATGCTCACCAACCCTCAAGGTTTAGAGCTATGGAGATCATCATATTTTTCTTTAGGCAGAATTTCAAGAGGTCTAATGAAGGATGATGGAAATTTTCTATTACTAGACCAAAATTATGTTGTATTATGGCAGAGTTTCAATCATTTCACCGACACATTAGTTCCTGGTCAAGAAATGAATTCAAATAACTATCTTTATTCTCGACAAGGAGAATTCAATTTCTCGCATGGAAAGTTTGAACTTCACCTACAAAAAAATGGAGATGTGCTCCTCAACCTTATAAATTTGCATACAAATACAAACCACGATACTCAACCAGATGCTTACTATGATAGTGGCATTGTTGATCCTGAAAATCAATCATCAAATTTTGGCACCAAATTTATATTTGACAAGTCAGGGTTGTTCTTATACATATTGAAAACAAAGGGGACAAAGTTTAAAATAATCACCAATCCAAATACGACAGTTTCAAATGGTGGCTTCTACTCCAAAGCAACAATCAATTATGATGGAGTTTTTACCCTCTCATATCATCCTAAAGATCTAAGAAACGGTCAAAGATGGATCGTGGCAAAGACAATACCAGAAAACATTTGTTTAAATTCTACATTTAACAATGGTCAAAGTATTTGTGGGTTGAATAGCAATTGTACCCTTAGAGATGACCAAAGGCCAATGTGTACTTGTCTAGAAGGATATTCTCTAATTGATTCAAACAACATGTATGGGGATTGCATACCAAATTCCCAAATGAAGAAAATTGATTCTCCATCACCTCTCTCCAATTTGAAGGAAGATCACGATGATAAAACCAAAAAGAGAAAAGGTCATGATACTTTGATCATTTTGATATCAATTCTTTTAGGAATTTCTGTGATTATAATTGTAGGATTGGTTTGTACAATTTGCTTTGGGCACAATCGCAAGAAGATCAGAAGCGGTGCAACCAAAAAAAGTGTCGGTGACAAAAATTTGCGAATTTTTACCTTCAAAGAAATTCTAGAAATAACAAATAACTTCAATGAAGAATTAGGAAGGGGGTCATGTAGTGTTGTATACAAAGGAACAATAGATGTAGATATTAGTGTGGCCGTTAAGAAATTGGACAAGTTGTTTCAAGATAGTGACAAGGAATTTCAAACTGAAATGAATGTGATACTCGAAACTCATCATAGGAATCTTGTTCGTCTTCATGGGTATTGCAGTGACGATCAACACCGGATTTTGGTGTATGAATTGATGAGTAATGGTACTTTAGCAAGCTTCCTTTTCACTCCTTTGAAACCAAGTTGGAACCAACGAGTTCAAATTGCCACCGGAATTGCAAGAGGTCTTATTTACTTGCATGAGGACTGTTGCACCCAAATCATCCATTGTGACATAAAGCCACAAAACATACTTCTAGATGATGATTACAATGCTAAGATTTCCGATTTCGGTTTAGCAAAACTATTACTGATTAATCAAAGTCACACTAAAACCGGAATTAGAGGAACCAAAGGGTATGTTGCACCAGATTGGTTTAGGAGTGCACCAATCAGCGCTAAGGTTGATGTTTACAGTTTTGGTGTCTTGTTTCTTGAAATAATTTGTTGTAGAAAAAATGTAGAGCATGAAAATGCAAGTGAAGAAAAGAGGATTTTAACTGATTGGGCATATGATTGCTACAAGGCTAATAATTTGGACCTTCTTCTAGAAAATGAATGTGAGGTTGTCAATGAAATGAGTAGAGTGGAAAAATTTGTCATGATTGCTATTTGGTGTACTCAAGAAGATCCATCTCTTAGACCAACAATGAAGAAGGTTTTGCAAATGCTAGAAGAGATTGTTGAAGTTGCAATTCCTCCAAGTCCCTACCTCTATGGTTCTTTTAGTTGA 2688 0.3761 MSPTTWSGHFWGRTVCKTDSATENFSCVTGDCGTGKVECDINKGMSPATRAEFRLGDDGLDFYTVNVVEGFNIPIAVTPMSASGENLNCSSAGCPANINTMCPTELKVMENEDVVACQGACSTDNLENFCCLKSNFSTSETCDPSSYALTFKTACPHAYSYPHNKENTFSCSSKLYKIIFCPASSDDDSMGSLGGSVSLGDSLTAGNGTTRWLSPSGDFAFGFYQLPNQLFLLAIWYVKIQTDSIIWYANGDNPVPKGSTLVLNDSHGLMLTNPQGLELWRSSYFSLGRISRGLMKDDGNFLLLDQNYVVLWQSFNHFTDTLVPGQEMNSNNYLYSRQGEFNFSHGKFELHLQKNGDVLLNLINLHTNTNHDTQPDAYYDSGIVDPENQSSNFGTKFIFDKSGLFLYILKTKGTKFKIITNPNTTVSNGGFYSKATINYDGVFTLSYHPKDLRNGQRWIVAKTIPENICLNSTFNNGQSICGLNSNCTLRDDQRPMCTCLEGYSLIDSNNMYGDCIPNSQMKKIDSPSPLSNLKEDHDDKTKKRKGHDTLIILISILLGISVIIIVGLVCTICFGHNRKKIRSGATKKSVGDKNLRIFTFKEILEITNNFNEELGRGSCSVVYKGTIDVDISVAVKKLDKLFQDSDKEFQTEMNVILETHHRNLVRLHGYCSDDQHRILVYELMSNGTLASFLFTPLKPSWNQRVQIATGIARGLIYLHEDCCTQIIHCDIKPQNILLDDDYNAKISDFGLAKLLLINQSHTKTGIRGTKGYVAPDWFRSAPISAKVDVYSFGVLFLEIICCRKNVEHENASEEKRILTDWAYDCYKANNLDLLLENECEVVNEMSRVEKFVMIAIWCTQEDPSLRPTMKKVLQMLEEIVEVAIPPSPYLYGSFS* 896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2281 895 Pfam Thaumatin family 3 182 IPR001938 -
Mtr2g2281 895 Pfam D-mannose binding lectin 245 332 IPR001480 -
Mtr2g2281 895 Gene3D - 318 479 - -
Mtr2g2281 895 SMART blect_4 202 318 IPR001480 -
Mtr2g2281 895 SMART serkin_6 608 880 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g2281 895 SUPERFAMILY alpha-D-mannose-specific plant lectins 231 360 IPR036426 -
Mtr2g2281 895 Pfam Protein kinase domain 611 874 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g2281 895 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 538 894 - -
Mtr2g2281 895 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 114 521 - -
Mtr2g2281 895 Gene3D Thaumatin 1 182 IPR037176 -
Mtr2g2281 895 ProSiteProfiles Bulb-type lectin domain profile. 188 316 IPR001480 -
Mtr2g2281 895 PRINTS Pathogenesis-related protein signature 9 20 IPR001938 -
Mtr2g2281 895 PRINTS Pathogenesis-related protein signature 61 77 IPR001938 -
Mtr2g2281 895 PRINTS Pathogenesis-related protein signature 172 181 IPR001938 -
Mtr2g2281 895 ProSiteProfiles Protein kinase domain profile. 608 890 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g2281 895 ProSitePatterns Serine/Threonine protein kinases active-site signature. 726 738 IPR008271 GO:0004672|GO:0006468
Mtr2g2281 895 SUPERFAMILY Osmotin, thaumatin-like protein 2 182 IPR037176 -
Mtr2g2281 895 CDD B_lectin 213 318 IPR001480 -
Mtr2g2281 895 SUPERFAMILY Protein kinase-like (PK-like) 593 877 IPR011009 -
Mtr2g2281 895 Gene3D Phosphorylase Kinase; domain 1 582 683 - -
Mtr2g2281 895 ProSiteProfiles Thaumatin family profile. 1 182 IPR001938 -
Mtr2g2281 895 Gene3D Transferase(Phosphotransferase) domain 1 684 884 - -
Mtr2g2281 895 Gene3D - 194 317 IPR036426 -
Mtr2g2281 895 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 538 894 - -
Mtr2g2281 895 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 114 521 - -
Mtr2g2281 895 SMART tha2 2 182 IPR001938 -
Mtr2g2281 895 CDD STKc_IRAK 614 879 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2281 Mtr-Chr2 34511602 34514620 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2281 594 877 Receptor kinase-like Gene Family AT1G60800 42.612 2.80e-70 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Mtr2g2281 Pkinase 2.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2281 - - mtr:MTR_2g067970 1792.7