Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2279 ATGGCGACGAACAAGATCGAACGCGGTCACCAGATGTACCGTGACGGACTCTACAAAGAGGCGTTAGCGTTTTACACGGACGCTATTGTTATGGCAAAGACGAATCCTCAGAAGATCGCTTTGCATAGTAATCGTGCTGCTTGTTTTCTTAAGCTTCATGATTTTAAAAAGGCAGCAGAAGAATGTACTTCGGTGCTTGAGCTTGATAGCAATCACAGTGGAGCATTGATGCTGAGGGCTCAAACTCTGGTGACACTGAAGGAGTACCATTCAGCACTTTTTGATGTCAACAGACTCTTGGAGTTGAATCCATCCTCAGAAGTCTATCAAAATCTTCATGCTCGCTTGAAGACACAGTTGTCACTTGCTCCAATACCAGAGTCAGAAGAGGAGTTCGAGGAACATGAAGATGAGATGGACAAGGCGATGCTAGAAAGAGAGGAAAGGAAGGAAGAAATGGGACAGAAACATGCAGCAGCTTCTAATGTTAGGAAAGATCTAAAGGGTCAGCTTGGCAAAGGTGTTATCAATATTGAATGTGGTCCAAAACAAACAGACCCCAGGTTTTCATCCAAATTGGGAAGTGACCAAAACTATGAGACTTGTAGGTCGACGACAGAGCATACAGTTCCTAAAGCACAAAACAAGGAATCATCCAAGCAACAATCCAAAGCATGGACAACAATTCCAAAACCAAAAGGACATTCAGCTTTGGACTACGCTCGGTGGGACAATGTAGAAGATGATTCTAGTGAAGATGAGGATGAAGATGATGAATCTTTACCACAGTACCGTTTTCGTGTAAAAACAATTGGTGTACGTCCTGTGAAATGA 834 0.4317 MATNKIERGHQMYRDGLYKEALAFYTDAIVMAKTNPQKIALHSNRAACFLKLHDFKKAAEECTSVLELDSNHSGALMLRAQTLVTLKEYHSALFDVNRLLELNPSSEVYQNLHARLKTQLSLAPIPESEEEFEEHEDEMDKAMLEREERKEEMGQKHAAASNVRKDLKGQLGKGVINIECGPKQTDPRFSSKLGSDQNYETCRSTTEHTVPKAQNKESSKQQSKAWTTIPKPKGHSALDYARWDNVEDDSSEDEDEDDESLPQYRFRVKTIGVRPVK* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2279 277 MobiDBLite consensus disorder prediction 146 163 - -
Mtr2g2279 277 SUPERFAMILY TPR-like 6 120 IPR011990 GO:0005515
Mtr2g2279 277 Coils Coil 125 152 - -
Mtr2g2279 277 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 2 277 - -
Mtr2g2279 277 MobiDBLite consensus disorder prediction 188 229 - -
Mtr2g2279 277 SMART tpr_5 39 72 IPR019734 GO:0005515
Mtr2g2279 277 SMART tpr_5 2 35 IPR019734 GO:0005515
Mtr2g2279 277 SMART tpr_5 73 106 IPR019734 GO:0005515
Mtr2g2279 277 MobiDBLite consensus disorder prediction 146 166 - -
Mtr2g2279 277 Gene3D Tetratricopeptide repeat domain 1 157 IPR011990 GO:0005515
Mtr2g2279 277 MobiDBLite consensus disorder prediction 178 277 - -
Mtr2g2279 277 Pfam Tetratricopeptide repeat 51 116 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2279 2 120 Calmodulin-binding Proteins AT3G25230 33.588 2.80e-13 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2279 - - gmx:100801778 392.504