Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2273 ATGCAAATTTCTCCTTTCGATTGCCAAGAAGTAGATGCTTCATCTCTTGGATGGGCTATGTCAGCAGTTTCATCTAGAGCATTCAAGTTACATGGTAACAAGCAATCGAATGGGGTAAACTTTGACATTCCCATGATGCTCCCTCTAATTGACATGTGTAATCATAGTTTCAATCCAAATGTTAGAATTGTTCAGGAACAAGAAACTGGTAGCACAAAGATGTGGGTGAAGGTTGTGGCTGAGAAAGCAATCAAGGAAGACGACCCTTTATTACTTTGCTATGGATGTTTAAGCAATGATCTTTTCCTTCTTGATTATGGATAG 324 0.3889 MQISPFDCQEVDASSLGWAMSAVSSRAFKLHGNKQSNGVNFDIPMMLPLIDMCNHSFNPNVRIVQEQETGSTKMWVKVVAEKAIKEDDPLLLCYGCLSNDLFLLDYG* 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2273 107 Pfam SET domain 16 95 IPR001214 GO:0005515
Mtr2g2273 107 SUPERFAMILY SET domain 3 107 IPR046341 -
Mtr2g2273 107 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 3 107 - -
Mtr2g2273 107 Gene3D set domain protein methyltransferase, domain 1 2 107 - -
Mtr2g2273 107 CDD SET_LSMT 9 107 - -
Mtr2g2273 107 PANTHER F21J9.27 3 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2273 Mtr-Chr2 34368075 34368564 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mtr2g2273 SET 5e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2273 - - mtr:MTR_5g010630 193.741