Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2266 ATGGGAAAAGGAAGAGCACCATGTTGTGATAAGAGTCAAGTTAAGAGAGGACCTTGGAGCCCTGCTGAAGATCTCAAACTTATAGCTTTTGTTCAGAAATTTGGTCATGAAAATTGGAGAGCTCTCCCTAAACAAGCAGGTCTTCAACGATGTGGGAAAAGTTGTCGTTTGAGATGGATCAATTATCTTAGGCCTGATTTAAAGAGAGGCAATTTTACAGTTGAGGAAGAGGAAACCATAATAAAGCTACATAAAACCTTGGGAAACAAATGGTCAAAGATTGCATCTTATTTTCCTGGTAGAACTGATAATGAGATCAAGAATGTGTGGAACACACATTTAAAGAAAAAACTTGTTGTCAAAAAATCAGAGTCAAGTGGAGATGAATCTAAGTTAGAATCATCAATAACCTCACCCTCTTCATCAGAATCATTTTTATCAAATGAGGTACCAATGAAAGATTCTGAAAAACAAGTATCCAACAATGAACTTGTTATAATCAATGAGGATCCAAAAGGGTCATCATCAAATTCATTATCATCTTCAATTGAGTCTAATACAATCTTGAACTCAAGCCAAATTGTTGACAACAATAATTTAGAACAAGAATTGGCTTCTCTAGGGTTTTATGATGATCCAAACAATTTGATTGAAATACCATGGGAATCAGATTATGATCTTTGGAATTTTATTGACAACATTGGAACTTATCAATCAAATGTTGGTGAAGAGACTGTTCAAGATGTTGTTGAAGCAAAAAATTGGTCATCACATGATGAATTTGAGAATGAGTTTGGAGTAGTAGGTGAAACAAAGGAGTCAAACAACAAAGATGATGAGGTCCTACCAAAGAATTATGAAGTTGAACAAGAAATTGACCCTCATGAGGCATTTGATTTCAATGATATTATAATGCAAGATTCTGAATTAGATTTTGGTAATATTCAATTGTGGCCCTCTTTGCCTCAAAATGGTATTCCAAAAGTTTAA 990 0.3424 MGKGRAPCCDKSQVKRGPWSPAEDLKLIAFVQKFGHENWRALPKQAGLQRCGKSCRLRWINYLRPDLKRGNFTVEEEETIIKLHKTLGNKWSKIASYFPGRTDNEIKNVWNTHLKKKLVVKKSESSGDESKLESSITSPSSSESFLSNEVPMKDSEKQVSNNELVIINEDPKGSSSNSLSSSIESNTILNSSQIVDNNNLEQELASLGFYDDPNNLIEIPWESDYDLWNFIDNIGTYQSNVGEETVQDVVEAKNWSSHDEFENEFGVVGETKESNNKDDEVLPKNYEVEQEIDPHEAFDFNDIIMQDSELDFGNIQLWPSLPQNGIPKV* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2266 329 CDD SANT 71 113 IPR001005 -
Mtr2g2266 329 MobiDBLite consensus disorder prediction 129 158 - -
Mtr2g2266 329 SMART sant 68 116 IPR001005 -
Mtr2g2266 329 SMART sant 15 65 IPR001005 -
Mtr2g2266 329 Gene3D - 16 68 - -
Mtr2g2266 329 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
Mtr2g2266 329 Pfam Myb-like DNA-binding domain 69 114 IPR001005 -
Mtr2g2266 329 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Mtr2g2266 329 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 63 IPR017930 -
Mtr2g2266 329 SUPERFAMILY Homeodomain-like 14 110 IPR009057 -
Mtr2g2266 329 MobiDBLite consensus disorder prediction 130 158 - -
Mtr2g2266 329 PANTHER TRANSCRIPTION FACTOR MYB72 1 258 - -
Mtr2g2266 329 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 258 - -
Mtr2g2266 329 Gene3D - 70 138 - -
Mtr2g2266 329 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Mtr2g2266 329 CDD SANT 18 63 IPR001005 -
Mtr2g2266 329 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2266 Mtr-Chr2 34190663 34194694 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2266 1 288 MYB Transcription Factor Family AT1G79180 42.730 2.12e-74 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mtr2g2266 Myb_DNA-binding 1.1e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2266 K09422 - gmx:100101836 394.045