Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2193 ATGGAAAGAATGTTCCCTCCAAAGAAGCCTTCAACTATGAATTCACATGATAGACCCATGTGTGTTCAAGGTGACTCAGGTCTTGTTCTTACAACTGACCCAAAACCTCGTCTTCGTTGGACTGTTGAACTCCATGAACGTTTTGTTGATGCTGTTACTCAGCTTGGAGGACCTGATAAGGCCACTCCTAAAACTATCATGAGGGTTATGGGTGTGAAGGGTCTTACCCTTTACCATCTCAAGAGCCATCTTCAGAAATTTAGGCTTGGAAAGCAACCCCACAAGGAATTCAATGATCACTCAATTAAGGATGCTTCAGCTTTAGAACTGCAACGGAATACTGCTTCCTCTTCTGCTATGATTGGCCGCAACATGAATGAGATGCAAATTGAGGTGCAGAGAAGACTACATGAGCAGCTTGAGGTACAAAAACACCTTCAACTAAGAATTGAAGCTCAAGGGAAATACATGCAAAGTATATTGGAGAAAGCTTATCAAACACTTGCAGGTGAAAACATGGCATCTACAACTAATAACTTAAAGGGTGTTGTTGTAGGACCTCATGGAATGGCTGAAATGGGACTATTGAAAGAATTTGGTTCACCTCTTAGTTTTTCATCTTTTCAAGATCTCGACCTATTCGGAGGCGGCGGCGGCGGTGGTGATCAACTTGACCTTCAACAAAACATGGACAAGCAAACCCTAGATCATCATGGATTTATGCAAATCAATGAGAATTTATGTCTTGGCAAGAAAAGGCCTAACCCTAACACTAACCCTTATAGCGGAAATGGAAAAAACCCATTAATGTGGAGTGATGATTTAAGGCTTCAAGATTTAGGGACAGCTTCATCATGCTTGGATGATCCTTTCAAAGGTGATCAAATACAAATTGCACCTCCATCATTGGATAGAGGAAGTGATATTGAAACTATAGATATTTATGATACAAAGCCTTTACTTCAAGGGGAAATTTTAGGTGAAAAGAAATTTGATGCATCTATGAATAAACTTGAAAGACCTTCACCAAGAAGAGGGCCATCTCTTCATGCTGAAAGAATGAGTCCTATGATTAGTACTGGTACTATGGCACAAGGTAGAGGTTCACCATTTGGATAA 1119 0.4039 MERMFPPKKPSTMNSHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFNDHSIKDASALELQRNTASSSAMIGRNMNEMQIEVQRRLHEQLEVQKHLQLRIEAQGKYMQSILEKAYQTLAGENMASTTNNLKGVVVGPHGMAEMGLLKEFGSPLSFSSFQDLDLFGGGGGGGDQLDLQQNMDKQTLDHHGFMQINENLCLGKKRPNPNTNPYSGNGKNPLMWSDDLRLQDLGTASSCLDDPFKGDQIQIAPPSLDRGSDIETIDIYDTKPLLQGEILGEKKFDASMNKLERPSPRRGPSLHAERMSPMISTGTMAQGRGSPFG* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2193 372 Pfam MYB-CC type transfactor, LHEQLE motif 128 167 IPR025756 -
Mtr2g2193 372 MobiDBLite consensus disorder prediction 336 372 - -
Mtr2g2193 372 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 4 320 IPR044848 GO:0003700
Mtr2g2193 372 PANTHER MYB FAMILY TRANSCRIPTION FACTOR APL 4 320 - -
Mtr2g2193 372 MobiDBLite consensus disorder prediction 1 20 - -
Mtr2g2193 372 Gene3D - 34 92 - -
Mtr2g2193 372 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 35 90 IPR006447 GO:0003677
Mtr2g2193 372 SUPERFAMILY Homeodomain-like 34 90 IPR009057 -
Mtr2g2193 372 Pfam Myb-like DNA-binding domain 38 86 IPR001005 -
Mtr2g2193 372 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 92 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2193 Mtr-Chr2 32917609 32920153 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2193 4 372 G2-like Transcription Factor Family AT1G79430 56.234 4.99e-122 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mtr2g2193 Myb_DNA-binding 2e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2193 - - gmx:100793303 589.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2193 2 32917609 32920153 Mtr2g2193 2 32917609 32920153 ECH
Mtr2g2193 2 32917609 32920153 Mtr8g1450 8 18084690 18087938 PCT