Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2186 ATGGCTCCAATGACTCTACCACCAGGATTCAGGTTCCACCCTACAGATGAAGAACTTGTTGCTTACTACTTAGAAAGAAAAATAACAGGAAGAACTATAGAGCTTGATATCATTGCAGAAGTTGATCTCTATAAATGTGAACCTTGGGATTTACCAGAAAGATCATTTCTTCCTAGCAAGGATATGGAGTGGTATTTTTATAGTCCAAGAGATAGAAAGTATCCAAATGGGTCAAGAACAAATAGGGCAACAAGAGGTGGATATTGGAAAGCAACTGGAAAAGATAGGGCAGTAAACTCTCAAAAGAAACAAGTTGGAATGAAGAAGACACTTGTTTATTACAAAGGTAGAGCACCTCATGGGATTAGAACCAATTGGGTTATGCATGAATATCGACTTATTGAATCACATCCTGGTGCTTCTCTCTCCTCTTTGAAGGATTCATATTCATTGTGTCGAATTTTCAAGAAAACAATTCAAATTCCAACAAAAACTAATGAAGAAGAACAAGTTAAGGATACAAAAAAGGAAATGACGGTCTTTGAAGAGCAAGTGCAAGGGGAAGACTCAAGTGGTGGCACTGAGATTTCAAGAGAAATAATGCAAACTATGGATGAAAAAATTCTTAATCATGATGAACATCCAAAATTTCTATGTGATGCTTCTTCATCTGATGTCACTCAAGGAACATGTACACCAACAGAGACATGTAATAATATAATGACAGAGGATATTCATGCACAATTTGCTTATGATGAAGAAAATAGTTCAGCTATTTCTTATCCAATGGGAATAAGCTACCCCTCAAATTTATTTCAGGATATAGAAATACCTATGTATGGGTTCTATAATCAATTCCCGCAAACACCTTTAATGATGGAAGATTTCTCACAAATGGAGACAAAATCAATAATGAAGCCTGATATATCTCAAGACTGCTTTTTGTATGACAAATACAGAGACTGTATGAATGGAACACTAGAAGAAATCATCTCTTTATGTTCCTCTCAAGATCATTCTGTGGCTTTTCCTATGCCATAG 1041 0.3573 MAPMTLPPGFRFHPTDEELVAYYLERKITGRTIELDIIAEVDLYKCEPWDLPERSFLPSKDMEWYFYSPRDRKYPNGSRTNRATRGGYWKATGKDRAVNSQKKQVGMKKTLVYYKGRAPHGIRTNWVMHEYRLIESHPGASLSSLKDSYSLCRIFKKTIQIPTKTNEEEQVKDTKKEMTVFEEQVQGEDSSGGTEISREIMQTMDEKILNHDEHPKFLCDASSSDVTQGTCTPTETCNNIMTEDIHAQFAYDEENSSAISYPMGISYPSNLFQDIEIPMYGFYNQFPQTPLMMEDFSQMETKSIMKPDISQDCFLYDKYRDCMNGTLEEIISLCSSQDHSVAFPMP* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2186 346 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Mtr2g2186 346 Coils Coil 164 184 - -
Mtr2g2186 346 Gene3D NAC domain 15 161 IPR036093 GO:0003677|GO:0006355
Mtr2g2186 346 PANTHER NAC DOMAIN-CONTAINING PROTEIN-RELATED 1 166 - -
Mtr2g2186 346 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 166 - -
Mtr2g2186 346 ProSiteProfiles NAC domain profile. 6 157 IPR003441 GO:0003677|GO:0006355
Mtr2g2186 346 SUPERFAMILY NAC domain 3 157 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2186 Mtr-Chr2 32692555 32696784 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2186 1 332 NAC Transcription Factor Family AT1G54330 50.450 1.28e-98 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mtr2g2186 NAM 6.4e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2186 - - gmx:100808325 545.814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2186 2 32692555 32696784 Mtr2g2186 2 32692555 32696784 ECH