Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2163 ATGGCCAATTCTAAGTGGTCTCAAATTTTGTTCATTGTCATCATAACATTGGCAAACCTTTTCCAATGTAACATTGCAACAGATCCATTTGTCCAACAAGGACAGGACAATATTGGTAGAGCACTTCCAGGTCAAAACTTCAACATCAGCTTTGAACATTACTCTGGTTATATAACAGTGAATGAGGATGTTGGTAGGAACTTGTTTTACTGGTTCATTCAAGCTGATCATGTAGATCCTACTTCTAAGCCACTTCTTTTGTGGTTCAATGGTGGTCCTGGTTGTTCTTCTATTGCTTATGGTGAAGCTGAGGAAATTGGTCCTTTTCATATTAATTCAGATGGCAAAAACCTTCATTTTAATCCTTATTCTTGGAATCAAGTTGCCAATATTCTTTATATTGACTCTCCTGTTGGAGTTGGATTTTCATATTCAACAAAGAATTCATCTGATGACATTCTCAACAATGGCGATAAGAGGACAGCTGAGGATAATCTCATATTTCTATTAAAGTGGTTTGAGCGTTTTCCCCAGTACAAAAAAACAGACTTTTTCATCAGTGGTGAGAGCTATGCAGGACATTATGTTCCACAACTTAGCCAAGTTATTGTCAAGTACAACTCAGCTACAAAACACGATTCTATAAATTTCAAAGGTTTCATGGTGGGAAATGCTCTAACAGATGATTTCCATGATCAATTGGGGATTTTCGAGTTTATGTGGACAAATGGTATGATCTCGGATCAAACATTCAAGCTCTTGAACTTGCTATGTGATTTTCAGTCAGTCGAACACCCGTCACAGTCCTGTGAAAGGATCTTGGAAATTGCTGATAAGGAAATGGGTAATATAGACCCATACAGTATCTTCACTCCTCCTTGCCATGCTAATGATAATCAGCAGATCAAAAGAAAGAATAGTGTTGGAAGACTAAGAGGCGTGTATGATCCTTGCACCGAAAAGCACAGCACTATATACTTCAATCGACCAGAGGTCCAAAGGATTCTACATGTTGATCCAGATTATAAGCCTGCTAAATGGGAGACCTGCAGCACTGTGGTAAATACAAACTGGAAGGATTCTCCTAGAACAGTACTCGACATATATCGTGAACTTATTCCTACTGGTCTACGAATATGGATATTCAGTGGCAATACAGATGCTGTAATCCCAGTAACATCTACTCGCTATACTATAAATGCTCTCAAGCTTCCAACCGTGAGCCCTTGGCGTGCATGGTATGATGACGGGGAGGTAGGAGGATGGACCCAAGAATACGCCGGACTCACGTTTGTAAATGTAAGGGGTGCCGGGCATGAAGTTCCTCTGCATAGACCAAAACTTGCGCTAACATTGATCAAAGCCTTCTTAGCAGGAACCTCCATGCCAACTCTTGAACCACTCACCGCCGCCTCTTGA 1419 0.4052 MANSKWSQILFIVIITLANLFQCNIATDPFVQQGQDNIGRALPGQNFNISFEHYSGYITVNEDVGRNLFYWFIQADHVDPTSKPLLLWFNGGPGCSSIAYGEAEEIGPFHINSDGKNLHFNPYSWNQVANILYIDSPVGVGFSYSTKNSSDDILNNGDKRTAEDNLIFLLKWFERFPQYKKTDFFISGESYAGHYVPQLSQVIVKYNSATKHDSINFKGFMVGNALTDDFHDQLGIFEFMWTNGMISDQTFKLLNLLCDFQSVEHPSQSCERILEIADKEMGNIDPYSIFTPPCHANDNQQIKRKNSVGRLRGVYDPCTEKHSTIYFNRPEVQRILHVDPDYKPAKWETCSTVVNTNWKDSPRTVLDIYRELIPTGLRIWIFSGNTDAVIPVTSTRYTINALKLPTVSPWRAWYDDGEVGGWTQEYAGLTFVNVRGAGHEVPLHRPKLALTLIKAFLAGTSMPTLEPLTAAS* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2163 472 Pfam Serine carboxypeptidase 43 458 IPR001563 GO:0004185|GO:0006508
Mtr2g2163 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 121 133 IPR001563 GO:0004185|GO:0006508
Mtr2g2163 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 134 144 IPR001563 GO:0004185|GO:0006508
Mtr2g2163 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 172 197 IPR001563 GO:0004185|GO:0006508
Mtr2g2163 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 429 442 IPR001563 GO:0004185|GO:0006508
Mtr2g2163 472 ProSitePatterns Serine carboxypeptidases, histidine active site. 429 446 IPR033124 GO:0004185
Mtr2g2163 472 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 9 466 IPR001563 GO:0004185|GO:0006508
Mtr2g2163 472 ProSitePatterns Serine carboxypeptidases, serine active site. 186 193 IPR018202 GO:0004185
Mtr2g2163 472 Gene3D alpha/beta hydrolase 34 296 IPR029058 -
Mtr2g2163 472 Gene3D - 318 356 - -
Mtr2g2163 472 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 29 9 466 - -
Mtr2g2163 472 SUPERFAMILY alpha/beta-Hydrolases 41 462 IPR029058 -
Mtr2g2163 472 Gene3D - 365 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2163 Mtr-Chr2 32234601 32239529 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2163 345 462 Calmodulin-binding Proteins AT2G22960 24.370 2.47e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2163 K16297 - gmx:100805227 733.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2163 2 32234601 32239529 Mtr2g2163 2 32234601 32239529 ECH