Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2162 ATGGCCAATTCTGAGTGGTCTCAAATCTTTGCCATAACATTGGCAACCATTTTCCTATGCAACAACAATTTCACATTTGCAACAGACCCATTTGTCCAACAAGAACATGACAGGATTGATAGACCACTCCCAGGTCAAAACTTCAACATCAGCTTTGAACACTATTCTGGTTATATAACAGTGAATGAGGATGCTGGTAGGAACTTGTTTTACTGGTTCATTCAAGCTGATCATGTAGATCCTACTTCAAAGCCACTTCTTTTGTGGCTCAATGGTGGTCCTGGTTGTTCTTCTATTGCTTATGGTGAAGCTGAGGAAATTGGTCCTTTTCATATTAATTCAGATGGCAAAAACCTTCATTTTAATCCTTATTATTGGAATCAAGTTGCCAATTTTCTTTATATCGAATCTCCTGTTGGAGTTGGATTTTCATATTCAAAGAATTCATCTGACATTCTCAACAATGGCGATAAGAGGACAGCTGAGGATAATCTCATATTTCTTTTAAAGTGGTTTGAGCGTTTTCCCCAGTACAAAAAAACAGACTTTTTCATCAGTGGTGAGAGCTATGCAGGACATTATATTCCTCAACTTAGCCAAGTTATTGTCAAGTACAACTCGGCTACAAAACAAGATTCTATAAATTTCAAAGGTTTCCTGGTAGGAAATGCTGTAACAGATGATTTCCATGATCAATTGGGGATTTTCGAGTTTTTGTGGACAAATGGTATGATTTCGGATCAAACATTCAAGCTCTTGAACTTGCTATGTGATTTTCAGTCATTCGAACACCCGTCAAAGTCATGTGAAAGGATCTTGGAAATTGCTGATAAGGAAATGGGTAATATAGACCCATTCAGTATCTTTACCCCTCCTTGCCATGAGAATGATAATCAGCCGGATAGAAGAAAGCATAGTTTTGGAAGACTCAGAGGTGTGTATGATCCTTGTACAGAGAATCACAGTAATATATACTTCAATCGACCAGAGGTCCAAAGGGCTCTACATGTTAATCCAGATCATAAGCCTGATAAATGGCAGACCTGCAGTGATGTGGTAGGTACTAACTGGAAGGATTCACCTAGGTCAGTGCTCAATATATATCGTGAACTTATTCCTACCGGGCTGCGAATATGGATATTCAGTGGTAATACTGATGCTATAATCCCAGTAACATCTACTCGCTATTCCATAAATGCTCTTAAGCTTCCAACTGTGAGCCCATGGCGTGCATGGTATGACGATGGGGAGGTAGGAGGATGGACCCAAGAATACGCCGGACTCACATTTGTTAACGTAAGGGGTGCAGGGCACGAAGTTCCTCTGCATAGACCAAAACTTGCTCTAACATTGATCAAAGCCTTCTTAGAAGGAACCTCCATGCCAACTCTTGAACCACGCACACTCACCGCCACAATTTGA 1422 0.403 MANSEWSQIFAITLATIFLCNNNFTFATDPFVQQEHDRIDRPLPGQNFNISFEHYSGYITVNEDAGRNLFYWFIQADHVDPTSKPLLLWLNGGPGCSSIAYGEAEEIGPFHINSDGKNLHFNPYYWNQVANFLYIESPVGVGFSYSKNSSDILNNGDKRTAEDNLIFLLKWFERFPQYKKTDFFISGESYAGHYIPQLSQVIVKYNSATKQDSINFKGFLVGNAVTDDFHDQLGIFEFLWTNGMISDQTFKLLNLLCDFQSFEHPSKSCERILEIADKEMGNIDPFSIFTPPCHENDNQPDRRKHSFGRLRGVYDPCTENHSNIYFNRPEVQRALHVNPDHKPDKWQTCSDVVGTNWKDSPRSVLNIYRELIPTGLRIWIFSGNTDAIIPVTSTRYSINALKLPTVSPWRAWYDDGEVGGWTQEYAGLTFVNVRGAGHEVPLHRPKLALTLIKAFLEGTSMPTLEPRTLTATI* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2162 473 SUPERFAMILY alpha/beta-Hydrolases 41 461 IPR029058 -
Mtr2g2162 473 Pfam Serine carboxypeptidase 44 458 IPR001563 GO:0004185|GO:0006508
Mtr2g2162 473 Gene3D - 364 458 - -
Mtr2g2162 473 ProSitePatterns Serine carboxypeptidases, histidine active site. 428 445 IPR033124 GO:0004185
Mtr2g2162 473 ProSitePatterns Serine carboxypeptidases, serine active site. 185 192 IPR018202 GO:0004185
Mtr2g2162 473 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 12 465 IPR001563 GO:0004185|GO:0006508
Mtr2g2162 473 Gene3D - 317 355 - -
Mtr2g2162 473 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 29 12 465 - -
Mtr2g2162 473 Gene3D alpha/beta hydrolase 34 295 IPR029058 -
Mtr2g2162 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 122 134 IPR001563 GO:0004185|GO:0006508
Mtr2g2162 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 135 145 IPR001563 GO:0004185|GO:0006508
Mtr2g2162 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 171 196 IPR001563 GO:0004185|GO:0006508
Mtr2g2162 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 428 441 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2162 Mtr-Chr2 32227028 32233528 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2162 327 461 Calmodulin-binding Proteins AT2G22960 24.265 1.29e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2162 K16297 - gmx:100805227 722.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2162 2 32227028 32233528 Mtr2g2162 2 32227028 32233528 ECH