Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2143 ATGGAACCCATTGATGAAAACGAAGAGCATGTTATAAATGAGACCGTCAATAGTGATTCATATGTTGGTGATTTAGATGCTAACAATTTTGAACAACCTTCTCTTGGAATGGAATTTGAGTCACAGGAAGATGCTTATTCTTTCTATGTTCGATATGCTAAATGTGTCGGATTTGGTGTATCCATTAAAAGCAGTCGCCGTTCAAAAATTTCTAGACAATTTATTGATGTGAAATATGCTTGCACAAGATATGGGAAAAAACGAGAGTCGACCGCACAAAATCCACGTCCTTGTTTGAAGGTGGAATGTGAGGCTGGCTTACATATTAAAAGAAGATGTGATGGAAAATGGGTGGTCCATGGCTTCATCAAAGATCACAATCATGAACTTTTTCCAACATATGCACATTATTTTCCATGCCATAGAACAATCAATAAAGCTCAACAGAATTGTATTGAAACTTTGCAACATGTTGGAGTGAGAACAAGCAAAATCTTTGCCACAATGGCCAAACAACACGGAAGATATGAGAAAGTTGGTTGCTTGGAGAAAGATGTTAGAAATTATTTAGATAAGGACCGTCGTTTGAATTTAGAATCAGGAGATGCAAAGGCAATGCTGTAG 624 0.3702 MEPIDENEEHVINETVNSDSYVGDLDANNFEQPSLGMEFESQEDAYSFYVRYAKCVGFGVSIKSSRRSKISRQFIDVKYACTRYGKKRESTAQNPRPCLKVECEAGLHIKRRCDGKWVVHGFIKDHNHELFPTYAHYFPCHRTINKAQQNCIETLQHVGVRTSKIFATMAKQHGRYEKVGCLEKDVRNYLDKDRRLNLESGDAKAML* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2143 207 Pfam FAR1 DNA-binding domain 47 132 IPR004330 -
Mtr2g2143 207 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 14 207 IPR031052 GO:0006355
Mtr2g2143 207 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 14 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2143 Mtr-Chr2 31991053 31992557 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mtr2g2143 FAR1 4.6e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2143 - - dzi:111309578 245.743