Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2127 ATGGTTCTCATGGATGCATCTGGAAACAAGATTCACGCCACTGTACGAAGAACTCTGATCTACAAATTTGAGAAGGACCTGCAGGAGGGAAAGGTCTACTCTATGAGTGGCTTTGGTGTTGCTGCGAATCTTGGATCTTATCGCACCACAAAGCACGAATACAAACTCAATTTCCAATTTAACACCAAAGTGAAATTGTGTGGCAAAAATAGTGTTCCGGATGATATCTATCCGATATCAAATTCTATTGTTGTTTTCAATTCTGAATACGACACTGATTACTTAGTCGATGTCATGGGTATGTTGACCGGTGTTGGCATGCAAAGGGAATATGAACGAAATGGAGCAAAAACTAAGATGGTGGCCATGAAATTGAATTACGATGGGTTTAAATTTAAGGTCACTCTATTTGGACAATATGCTGATGAACTTAATGCTTTTGTTGCTGCCGGAGAGACCAATAAGGTCATTGTGGTTGTCCTGTTGGCCAAAGTTAAGATCTGGCAAGTGTTAGAGTTTATATTCTGA 528 0.3977 MVLMDASGNKIHATVRRTLIYKFEKDLQEGKVYSMSGFGVAANLGSYRTTKHEYKLNFQFNTKVKLCGKNSVPDDIYPISNSIVVFNSEYDTDYLVDVMGMLTGVGMQREYERNGAKTKMVAMKLNYDGFKFKVTLFGQYADELNAFVAAGETNKVIVVVLLAKVKIWQVLEFIF* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2127 175 Gene3D - 1 67 IPR012340 -
Mtr2g2127 175 PANTHER ANIMAL RPA1 DOMAIN PROTEIN 1 170 - -
Mtr2g2127 175 Pfam Domain of unknown function DUF223 1 95 IPR003871 -
Mtr2g2127 175 PANTHER REPLICATION FACTOR A 1, RFA1 1 170 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Mtr2g2127 175 Gene3D - 75 172 IPR012340 -
Mtr2g2127 175 SUPERFAMILY Nucleic acid-binding proteins 1 68 IPR012340 -
Mtr2g2127 175 CDD RPA1_DBD_A_like 1 64 - -
Mtr2g2127 175 SUPERFAMILY Nucleic acid-binding proteins 88 169 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2127 Mtr-Chr2 31840736 31842151 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2127 3 142 Core DNA Replication Machinery Family AT2G06510 27.211 1.67e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2127 - - mtr:MTR_2g062200 331.643