Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2103 ATGGAGCTAGGTTTAAGCTTAGGAGACTCTTCAAAGCCTCTAATTGGGTTAATGGAAAAGCATCCTCATCAAACTTCCAAAGAACTTGGCTTAGGCTTCAACACCACTTTATCAATTTGTCCAATCATTAATACTACACCAAGAGATCAACTTCATCAACAACAAGAAGAAGAAAAGACTCAAAGAGACATCAACATCAACAACAACAGTAATAGAACTGAAAATCCTAATCATGTATTGCATCAACTTGATCTTCTTCCTCAACTCTCATTCCCATGGAATAATCCTTCTCAAAACGGTAATCTATTATCAACCGAGTTTGGAGGTTGTTCAAGGGGATTGGATGTGAACGTGGTTCCACCGGCGACGGTGGTTGTTATGGCGGATGATGAGATTGCGCTTTCATCGTCCCCGAATAGTGCAGCATCTTCTTTTCAGATGGATCTATGCATGTACAGTCGAGGAGGAAGTGGTGGTAGGAGTTTGAGTGGTTCAGGAGGGAACAAGAGAGAATTTTCTGATGGTGAAGGCTATGATCAAAGGAATTCATCAAGAGTTAGTGATGAAGATGATAACTGTGGTGTTCGTAACACAAGGAAGAAACTTAGGCTCTCTAAGGATCAATCTGCTTTTCTTGAAGAAAGTTTCAAAGAACATCACACTCTTAACCCTAAACAAAAACTGGCTCTTGCAAAACAACTCAATCTTCGCCCTCGCCAAGTAGAAGTCTGGTTCCAAAACAGAAGAGCAAGGACTAAGTTGAAGCAAACAGAAGTGGATTGTGAATACTTAAAGAGATGCTGTGAAACACTAACAGAAGAAAATAGGAGGCTACACAAGGAACTTCAAGAATTAAGAGCTTTAAAAACTTCAAATCCATTCAACATGCAATTACCAGCAACTACTTTAACTATGTGCCCTTCTTGTGAACGTGTTGCAACAAATTCTACAGCCACTTCATCTGTCACTAATACTAGTGCCACAATCAATGGTAATAACAATAACAAAATTAACCAGTGA 1020 0.3941 MELGLSLGDSSKPLIGLMEKHPHQTSKELGLGFNTTLSICPIINTTPRDQLHQQQEEEKTQRDININNNSNRTENPNHVLHQLDLLPQLSFPWNNPSQNGNLLSTEFGGCSRGLDVNVVPPATVVVMADDEIALSSSPNSAASSFQMDLCMYSRGGSGGRSLSGSGGNKREFSDGEGYDQRNSSRVSDEDDNCGVRNTRKKLRLSKDQSAFLEESFKEHHTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLHKELQELRALKTSNPFNMQLPATTLTMCPSCERVATNSTATSSVTNTSATINGNNNNKINQ* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2103 339 SUPERFAMILY Homeodomain-like 187 256 IPR009057 -
Mtr2g2103 339 MobiDBLite consensus disorder prediction 156 194 - -
Mtr2g2103 339 Pfam Homeobox associated leucine zipper 255 289 IPR003106 GO:0006355|GO:0043565
Mtr2g2103 339 Coils Coil 268 291 - -
Mtr2g2103 339 ProSiteProfiles 'Homeobox' domain profile. 195 255 IPR001356 GO:0003677
Mtr2g2103 339 Pfam HD-ZIP protein N terminus 61 145 IPR006712 GO:0005634
Mtr2g2103 339 MobiDBLite consensus disorder prediction 49 76 - -
Mtr2g2103 339 MobiDBLite consensus disorder prediction 172 194 - -
Mtr2g2103 339 Gene3D - 203 253 - -
Mtr2g2103 339 SMART HOX_1 197 259 IPR001356 GO:0003677
Mtr2g2103 339 ProSitePatterns 'Homeobox' domain signature. 230 253 IPR017970 GO:0000981|GO:0006355
Mtr2g2103 339 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 1 335 - -
Mtr2g2103 339 SMART halz 255 298 IPR003106 GO:0006355|GO:0043565
Mtr2g2103 339 PANTHER - 1 335 - -
Mtr2g2103 339 CDD homeodomain 199 256 IPR001356 GO:0003677
Mtr2g2103 339 Pfam Homeodomain 199 253 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2103 Mtr-Chr2 31473554 31475486 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2103 105 315 Homeobox Transcription Factor Family AT2G44910 54.955 4.32e-68 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mtr2g2103 HD-ZIP_N 4.5e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2103 K09338 - gmx:100805312 405.986