Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2096 ATGAATGATATGGAAAACCACCAAAACCAAAACAAAAACCCAAACCAAGACCTACAGGGTTGGGGCACGTGGGAAGAGCTTTTACTAGCCTCCGCCGTCGACCGCCATGGCTTCAAAGACTGGGACACCATCGCCATGGAGGTTCAGTCACGTACCAACCGCACTTCCCTCCTCGCCACCGCACACCACTGCGAACAAAAATTTCACGATCTAAACCGCCGATTCAAAGACGACGTCCCGCCGCCACAACAGAACGGCGATGTCTCCGCCGTCACGGCTGAAGATTCCGATCACGTTCCATGGCTTGATAAACTCCGTAAACAACGTGTTGCTGAGCTCCGTCGTGATGTCCAACTCAGCGACGTCTCCATTCTGTCGTTGCAGTTGCAGGTGAAAAAATTAGAAGACGAGAAAGCCAAAGAAAATGAGGAAAAAGTAGAAACAGAACCAGATCTGGCGGTTTCCGGCGAGGGACGGTTGCCGGAGAATGAAAAAACCGGTGGAGATATAGATGAACCGGTACCGGCTATTCGGCGGCTCGATGAAAGCACAACTAATACTGATAAGTTGTTACCAGCAGCGGGTGAAGAATCGGACCGGGATAATCAATCTGTTAATGAGTCAAACTCAACCGGTTCGAGGTTTGATGCATTGAAAACCGGTGAGGTTGATGTAAAATTAGGTTCTGGTCCAGGTCATGGTTCCGGTTCGGTTCAAGTTAAATCCGGTTTAAACGAACCGGATCAAACCGGGAGGAAAAGAAAATCGGTTGAGGAAGAATCGAATAACGGAAGCTATGATAACAACGAGGCTAAAGCTGTTACGTGTGAGTCGGTGCCTCCGAGTGAGGAAAGGAAGGTGGAGGATGACTCGGTGACTCGTTCGGAGGGGGGAGGGACGAGGGAGAGCAGTGAGGTGCAGAGTTCGTCGAGTTTGTCGAAGACGAGGAGGACACAGCGGCGGAGGAAGGAGGTTTCCGGTGAAGACGCAAAGATGGAGAATGAGGACGTGGCGGTGGTGAAATCAGAACCGTTGTTTGGCGTGTTGGAGATGATCAAAAGACATCAAAAATTTTCATTGTTTGAGCGCCGTCTTGAAAAAAACCAGGATTTGGACAGATACAAAAACACTGTGAAACGGCATGTGGACTTGGAAACCATACAGCTGAGGGTCCAAGAGGGTCACTATTCCTCAGGGACAAACACATTCTTCCTCGACCTCGTCACCCTCTTCAGCAATGCCACCGTGTTTTTCTCTCGTGGTTCGCCTGAATTGCGGGCTGCGCAGCAGCTGCGCCGCCTCATCCTTGATGAGATGAAAACCTTCGGCCAAGCACAATCCAACACTATCACCCAGAAGAGCGATTCACTCCCTCCAAACACACCACTATCCAGACCAGACTCTCTCTCCAAGCACAAACCTCCTATATTAGTTTGCCGCAAACGTAGTTCAATCCCAGTCAAACCTTCTACCACCACCTTTAGCCACAAGGGTGATCACAAACCCATCATCAATGACAAGAAGGAAAGGCCTTCCTCTGATGTGAAACCAACCTTAAAACCAAGTTATTCGGAGACAGATGAAGAGGAGCCTCCTAAGGCCAAGGAAAAGCCTGTCACTGGAGCTAGAAGCAGAAGAAGTAACAAGAACCTCAGCAGCAACGCCAGCAATAAGAAACCACCCTCTAACTCCACTCCTAGAACAGGGTCCTCGGCAAATAAACCGGCCGAGACCCCAAAATTGAAGAACAAAGCAGAGGGGGTGTCAGACAAGAAGAAGAACAACGGTGCTGCTGGTTTCTTGAATAGAATAAAGAAAAATGAATCGGTGGAGGTGCTGAGGAGTGGTAGTGGTGGTGGTGGAGGAAGTAGTGGAAGCAGTAAGGGTGGTGGTGGAGGTGGTACTAATACAAAAGAGCAGAAGAAAGTGGTGAACAATGGAAAAGGGGAGAAAGGGAAAGAAAGAGCTTCAAGGTATAACGATGGAGGAGGGTCTGGTTCAGGAGATAAGAGGAACAAGAATATTGAGAGCAACTCGAAGAGGAACGTTGGAAGACCTCCAAAAAAAGCAGCAGAGACCGTAGCTAGTACAAAGCGTGGAAGGGAAAGTAGTGCAAGTGGTGGCAAGGATAAGCGACCGAAAAAACGTTCTAAGAAGTGA 2160 0.4907 MNDMENHQNQNKNPNQDLQGWGTWEELLLASAVDRHGFKDWDTIAMEVQSRTNRTSLLATAHHCEQKFHDLNRRFKDDVPPPQQNGDVSAVTAEDSDHVPWLDKLRKQRVAELRRDVQLSDVSILSLQLQVKKLEDEKAKENEEKVETEPDLAVSGEGRLPENEKTGGDIDEPVPAIRRLDESTTNTDKLLPAAGEESDRDNQSVNESNSTGSRFDALKTGEVDVKLGSGPGHGSGSVQVKSGLNEPDQTGRKRKSVEEESNNGSYDNNEAKAVTCESVPPSEERKVEDDSVTRSEGGGTRESSEVQSSSSLSKTRRTQRRRKEVSGEDAKMENEDVAVVKSEPLFGVLEMIKRHQKFSLFERRLEKNQDLDRYKNTVKRHVDLETIQLRVQEGHYSSGTNTFFLDLVTLFSNATVFFSRGSPELRAAQQLRRLILDEMKTFGQAQSNTITQKSDSLPPNTPLSRPDSLSKHKPPILVCRKRSSIPVKPSTTTFSHKGDHKPIINDKKERPSSDVKPTLKPSYSETDEEEPPKAKEKPVTGARSRRSNKNLSSNASNKKPPSNSTPRTGSSANKPAETPKLKNKAEGVSDKKKNNGAAGFLNRIKKNESVEVLRSGSGGGGGSSGSSKGGGGGGTNTKEQKKVVNNGKGEKGKERASRYNDGGGSGSGDKRNKNIESNSKRNVGRPPKKAAETVASTKRGRESSASGGKDKRPKKRSKK* 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2096 719 CDD SANT 21 52 IPR001005 -
Mtr2g2096 719 PANTHER DNA-BINDING BROMODOMAIN-CONTAINING PROTEIN 4 719 - -
Mtr2g2096 719 PANTHER DNA-BINDING BROMODOMAIN-CONTAINING PROTEIN 4 719 - -
Mtr2g2096 719 Gene3D - 18 70 - -
Mtr2g2096 719 Gene3D - 345 456 IPR036427 GO:0005515
Mtr2g2096 719 MobiDBLite consensus disorder prediction 74 94 - -
Mtr2g2096 719 CDD Bromodomain 348 439 - -
Mtr2g2096 719 MobiDBLite consensus disorder prediction 247 261 - -
Mtr2g2096 719 MobiDBLite consensus disorder prediction 544 577 - -
Mtr2g2096 719 MobiDBLite consensus disorder prediction 297 314 - -
Mtr2g2096 719 MobiDBLite consensus disorder prediction 643 658 - -
Mtr2g2096 719 Coils Coil 124 144 - -
Mtr2g2096 719 Pfam Bromodomain 348 429 IPR001487 GO:0005515
Mtr2g2096 719 SUPERFAMILY Bromodomain 343 442 IPR036427 GO:0005515
Mtr2g2096 719 MobiDBLite consensus disorder prediction 673 696 - -
Mtr2g2096 719 MobiDBLite consensus disorder prediction 448 467 - -
Mtr2g2096 719 MobiDBLite consensus disorder prediction 279 296 - -
Mtr2g2096 719 MobiDBLite consensus disorder prediction 448 719 - -
Mtr2g2096 719 MobiDBLite consensus disorder prediction 136 334 - -
Mtr2g2096 719 MobiDBLite consensus disorder prediction 136 152 - -
Mtr2g2096 719 MobiDBLite consensus disorder prediction 499 543 - -
Mtr2g2096 719 MobiDBLite consensus disorder prediction 619 642 - -
Mtr2g2096 719 MobiDBLite consensus disorder prediction 162 185 - -
Mtr2g2096 719 SMART bromo_6 334 444 IPR001487 GO:0005515
Mtr2g2096 719 Pfam Myb-like DNA-binding domain 21 52 IPR001005 -
Mtr2g2096 719 ProSiteProfiles Bromodomain profile. 353 425 IPR001487 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mtr2g2096 Bromodomain 1.8e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2096 - - gmx:100779988 758.059