Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2088 ATGGAATTTAGAGAGCTGAAGTTGGTTGCATTTTTTGCTCTATGTCTCATTCTAATATCTCCAGCTGAGGCATTTGATCCATTGGATCCAACTGGAAATGTGACAATAAGATGGGATATTATGTCATGGACATCAGATGGATATATGGCAACTGTAACTTTGTTCAACTTTCAACTATATCGAAACATTATGAATCCGGGATGGACATTAGGATGGACATGGGCCAAGAAAGAAATAATATGGGCCATGATGGGAGCGCAGGCAACAGAACAAGGCGATTGTTCAAAGTTCAAGTTAAAGATTCCTCATAGTTGCAAGAGAAGTCCTCAAGTTGTTGACTTATTACCAGGAGCATCTTACAATATGCAATACACGAATTGTTGCAAAGGTGGTGTGCTAACATCGTGGGGACAGGATCCTTCAGGTGCGATCTCGGCATTTCAGATGGGTGTAGGACTCTCCGGAAGAACTAACAAGACAGTTAAACTGCCTCAGGATTTTAAATTGCTTGGACCGGGAGCGGGATATTCATGTGGCCCTGCTAAGAGAGTTCCTTCAACTGTTATTCTTACAGATGATCGTAGGCGAAAAGCTCAAGCTTTGATGTCCTGGAATGTGACATGTACTTATTCACAATTTCTTGCCTCCAAAAACCCAAGCTGTTGTGTTTCTTTATCAACATTCTACAATGACCAAGTCACAGCTTGTCCAACTTGTGCTTGTGGTTGTCAGAATAATGCTACTTGCGTCACGAAAGATTCAAAGATCCTGAAAGAGGTTGCTGGAAATAACAAGACTAGGAAGAGTGATATCGCACCAAAACCTTTATTGCAATGCACGCGCCACCTTTGTCCTGTTCGTGTGCATTGGCATATAAAAGACAATTACAAGGATTATTGGCGTGTAAAGATTGCAATCATCAACTTCAAATATAGACTGAATTACACACAATGGGGTCTAGTTGTGCAACACCCTAATCTCAGTAATGTTACCCAAGTCTATAGTTTTGAATACATGCCACTTCTTCCCTATGAAGCCATAAATGACACAGGAATGTTCTATGGTTTGAAATTTTACAATGATCTAATAATGGAAGCTGGGTCTAAAGGGAATGTACAATCTGAGGTGCTTATGAAGAAGGACAAGAACACATTTACACTAAAGCAAGGATGGGCTTTTCCTAGAAGGGTATACTTTAATGGTGATGAATGTATGCTTCCACCTCCTGATTCATACCCTTTCTTGCCAAATTCTGCTCGAAGGCTACCAACGAGTTTTGTAACGATGACAACCTATGTGATTGTTGCATCATTTTTCATTTGGTTTTGA 1329 0.4033 MEFRELKLVAFFALCLILISPAEAFDPLDPTGNVTIRWDIMSWTSDGYMATVTLFNFQLYRNIMNPGWTLGWTWAKKEIIWAMMGAQATEQGDCSKFKLKIPHSCKRSPQVVDLLPGASYNMQYTNCCKGGVLTSWGQDPSGAISAFQMGVGLSGRTNKTVKLPQDFKLLGPGAGYSCGPAKRVPSTVILTDDRRRKAQALMSWNVTCTYSQFLASKNPSCCVSLSTFYNDQVTACPTCACGCQNNATCVTKDSKILKEVAGNNKTRKSDIAPKPLLQCTRHLCPVRVHWHIKDNYKDYWRVKIAIINFKYRLNYTQWGLVVQHPNLSNVTQVYSFEYMPLLPYEAINDTGMFYGLKFYNDLIMEAGSKGNVQSEVLMKKDKNTFTLKQGWAFPRRVYFNGDECMLPPPDSYPFLPNSARRLPTSFVTMTTYVIVASFFIWF* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2088 442 PANTHER PROTEIN COBRA 4 442 IPR006918 GO:0010215|GO:0031225
Mtr2g2088 442 PANTHER COBRA-LIKE PROTEIN 4 442 - -
Mtr2g2088 442 Pfam COBRA-like protein 48 211 IPR006918 GO:0010215|GO:0031225
Mtr2g2088 442 PIRSF COBRA 1 442 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2088 Mtr-Chr2 31224637 31227355 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2088 3 435 COBRA Gene Family AT3G02210 58.219 0.0 568
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2088 - - gmx:100813134 799.66