Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2071 ATGCATACAGAGTCAAAAACAAGAACTACACTGCAAATGCAAATGAAGGACCCAGAAGAGCATCAAGTGAAATCAAAGCCTCTACAAAAATGTACAGAACGTAGAAGAAAGAGCAAAAAGAGAAGAAACCAAATCAAGACAGAAAAATCACATGAAACAGGAGTTGAATCAAAGAGTAGCCTAATGTTTCCTTGCAGGCCTGGTTATGGCCAACTTGGGACTAAGTGTCTCATCAAAGCCAACCATTTTCTTGTAGATATATCTGTCTCTGATTTAAGCCATTACAATGTTAAAATAATTCCTGAAGTTTGTTCTAGTAAAACAAGAAAGGCTGTCATATCTGAGCTTGTGAGGGTTCATAAGAACACTGATTTAGCGAATAGGCTTCCTGTGTATGATGGAGGAAGAAATCTTTACACTGCTGGTTTGCTTCCTTTTACTTACAAAGAATTCAGTGTGATATTGAGTGAAGAAGATTATGTTACCGGCGGTACCAGGGAACAAGAATTTAAGGTGGGAATCAAGTTTGCAACTAGTGTTAGAATGCAACAACTTAGGGAACTTCTAAGTGGGAAACAAGTTGACACTCCACAAGAAGCACTTAGTGTCTTTGACATTGTTTTGAAGGAGGTTGCAGCTCAAAGTTACATATCAATTGGGAGAAATTTCTATTCTCCTGATTTGAGGAAACCACAGCAACTTGGTGGTGGCATTGAATCATGGCGTGGATTTTACCAGAGTATAAGGCCAACTCAAATGGGATTATCACTAAACATTGATATGTCATCAATGGCATTTATTGAACCACTACCTGTAATTGACTTCGTTGCTCAAATTCTTGGGAAAGATGTGCACTCAAAACCATTGTCAGATGCAGATCGTGTCAAGATTAAAAAGGCCTTAAGAGGAGTAAAAGTTGAAGTCACACATAGAGGAAATTTCAGAAGAAAGTACAGAATATCAGGATTGACTTCACAACCCACAAGGGAGCTTATTTTTCCTCTTGATGAGCAAATGAATATGAAATCAGTAGTTGATTATTTTCAAGAAATGTATGGATATACGATCAAATATTCTCATTTACCTTGCCTTCAAGTAGGAAGTCAAAGGAAGTTGAACTATTTGCCCATGGAGGCATGCAAGATAGTTAGGGGCCAAAGACAAACAAAAGGACTGAATGAAAAGCAAATAACTTCTTTGTTGAAATTTTCATGCCAGAGACCCCGTGAACAAGAAACAGACATTTTACAGACAATTGAACAAAACAATTATGAAAATAATCCATATGCAAAGGAGTTTGGCATCAGCATAGATAAGAAGCTTGCATCAGTGGAGGCTCGGGTTCTTCCTTCTCCTTGGTTGAAATATCATGACTCTGGAAGAGAGAAAGAACACTTGCCACAAGTTGGTCAATGGAATATGCTGAACAAGAAAGTTATAAATGGAAGTAATGTAAGATACTGGGCATGCATCAATTTCTCAAGAAGTGTACAAGAAAGTACAGCTCATGGATTTTGCCAACAGTTGGTTCAAATGTGTCAAATCACAGGCTTGGAATTTAGTCAGGAGCCTGTGATTCCTGTATATTCAGCAAGACCAGATCAGGTCAAGAAGGCTTTGAAGTATGTACATACTACTGCTCTAGACAAACTTGATGGTAAAGAGCTAGAATTGTTGATTGCCATTCTTCCAGACAATAATGGCTCTTTGTATGGTGATCTCAAAAGAATCTGTGAAACAGATTTGGGGCTGATTTCTCAATGCTGCCTTGCAAAATATGTATTCAAGATTAATAGACAGTACTTGGCAAATGTTGCACTAAAAATCAATGTCAAGATGGGAGGAAGAAACACGGTACTTTTGGATGCTTTAAGTTGGAGGATTCCACTGGTTAGTGATATTCCAACAATAATATTTGGAGCTGATGTAACTCATGCAGAATCCGGAGACGATAGTGGCCCATCCATCGCTGCTGTTGTAGCCTCCCAGGACTGGCCAGAAGTAACAAAGTATGCAGGGTTGGTTTGCGCTCAGCCTCACCGTGAAGAGCTCATCCAAGATCTTTTCAAATCTTGGAAAGATCCACAGAGGGGAGTGGTTTACGGTGGTATGATCAGGGAGCTTTTACTCTCGTTTAAGAGGGCAACTGGACAAAAACCGTTGAGAATAATATTTTACAGGGATGGGGTAAGTGAAGGACAGTTCTACCAAGTTTTGTTGTATGAGCTTGACGCCATCCGAAAGGCTTGTGCGTCTTTGGAACCAAGTTACCAACCTCCGGTAACATTTGTTGTGGTTCAAAAACGGAATCACACTAGACTCTTCCCAAACAATCACGATGACAGAAACAGCACCGATACCAGTGGGAACATCTTACCTGGTACTGTGGTGGATTCAAAGATATGTCATCCTACTGAATTTGATTTCTATTTATGCAGTCATGCAGGAATTCAGGGTACAAGTAGACCAGCACACTATCATGTCCTCTGGGATGAGAACAATTTCAGTCCGGATGAGATTCAGTCTTTAACTAACAACTTATGCTACACCTATGCAAGATGTACGCGGTCTGTTTCTGTAGTGCCTCCAGCATACTATGCTCATTTGGCAGCCTACAGAGCTCGATGCTACATGGAACCCGACCATCCCGAGATTGCAAAACTGCGAGATGCGAGATCAAAAGATAGAGCTGTTAGGCCACTTCCTGCATTGAAAGAGAATGTGAAGAATGTAATGTTTTACTGTTGA 2748 0.4003 MHTESKTRTTLQMQMKDPEEHQVKSKPLQKCTERRRKSKKRRNQIKTEKSHETGVESKSSLMFPCRPGYGQLGTKCLIKANHFLVDISVSDLSHYNVKIIPEVCSSKTRKAVISELVRVHKNTDLANRLPVYDGGRNLYTAGLLPFTYKEFSVILSEEDYVTGGTREQEFKVGIKFATSVRMQQLRELLSGKQVDTPQEALSVFDIVLKEVAAQSYISIGRNFYSPDLRKPQQLGGGIESWRGFYQSIRPTQMGLSLNIDMSSMAFIEPLPVIDFVAQILGKDVHSKPLSDADRVKIKKALRGVKVEVTHRGNFRRKYRISGLTSQPTRELIFPLDEQMNMKSVVDYFQEMYGYTIKYSHLPCLQVGSQRKLNYLPMEACKIVRGQRQTKGLNEKQITSLLKFSCQRPREQETDILQTIEQNNYENNPYAKEFGISIDKKLASVEARVLPSPWLKYHDSGREKEHLPQVGQWNMLNKKVINGSNVRYWACINFSRSVQESTAHGFCQQLVQMCQITGLEFSQEPVIPVYSARPDQVKKALKYVHTTALDKLDGKELELLIAILPDNNGSLYGDLKRICETDLGLISQCCLAKYVFKINRQYLANVALKINVKMGGRNTVLLDALSWRIPLVSDIPTIIFGADVTHAESGDDSGPSIAAVVASQDWPEVTKYAGLVCAQPHREELIQDLFKSWKDPQRGVVYGGMIRELLLSFKRATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPSYQPPVTFVVVQKRNHTRLFPNNHDDRNSTDTSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFSPDEIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAYRARCYMEPDHPEIAKLRDARSKDRAVRPLPALKENVKNVMFYC* 916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2071 915 ProSiteProfiles PAZ domain profile. 270 384 IPR003100 GO:0005515
Mtr2g2071 915 SMART PAZ_2_a_3 274 406 IPR003100 GO:0005515
Mtr2g2071 915 SMART Piwi_a_2 558 879 IPR003165 GO:0003676
Mtr2g2071 915 Pfam Argonaute linker 1 domain 218 267 IPR014811 -
Mtr2g2071 915 SMART DUF1785_2 217 269 IPR014811 -
Mtr2g2071 915 ProSiteProfiles Piwi domain profile. 558 879 IPR003165 GO:0003676
Mtr2g2071 915 Coils Coil 28 48 - -
Mtr2g2071 915 Pfam PAZ domain 274 400 IPR003100 GO:0005515
Mtr2g2071 915 Pfam Argonaute linker 2 domain 412 456 IPR032472 -
Mtr2g2071 915 SUPERFAMILY PAZ domain 265 424 IPR036085 GO:0005515
Mtr2g2071 915 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 30 914 - -
Mtr2g2071 915 Pfam Piwi domain 559 878 IPR003165 GO:0003676
Mtr2g2071 915 PANTHER PROTEIN ARGONAUTE 10 30 914 - -
Mtr2g2071 915 SUPERFAMILY Ribonuclease H-like 547 880 IPR012337 -
Mtr2g2071 915 Gene3D - 627 915 IPR036397 GO:0003676
Mtr2g2071 915 Gene3D - 448 621 - -
Mtr2g2071 915 MobiDBLite consensus disorder prediction 1 59 - -
Mtr2g2071 915 Gene3D paz domain 264 388 - -
Mtr2g2071 915 CDD Piwi_ago-like 428 878 IPR045246 -
Mtr2g2071 915 Pfam Mid domain of argonaute 467 544 IPR032473 -
Mtr2g2071 915 MobiDBLite consensus disorder prediction 13 29 - -
Mtr2g2071 915 MobiDBLite consensus disorder prediction 30 44 - -
Mtr2g2071 915 Pfam N-terminal domain of argonaute 75 208 IPR032474 -
Mtr2g2071 915 CDD PAZ_argonaute_like 269 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2071 Mtr-Chr2 30625769 30645325 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2071 50 915 Eukaryotic Initiation Factors Gene Family AT5G43810 71.625 0.0 1360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2071 K11593 - gmx:100810235 1578.92