Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2061 ATGGCTATCCGAGCCACCTTCTCCTTTTCCGGCTATGTCGCCCAAACCCTAGTTTCCTCGGCCAGCGTTCGAGTCGCAAATCCTCGCGGTGTCCATGAATGCTGTATCCTCTCTCGTTTCTTTGGATCCAACCAAAAACCCGATCTGGATCGTTCCAGCTGCGGTATAGGCGAGAATTTCAGGAGGCCAAAAATGTCGACCTATTCTACTCTCGCCGGAGACCTTCTCACTGAAGGTTTGATCTGGATGATGAAGTCGTCGGCTGTTGTTCCTGGGTCATCAACTGGTATGATGGGTATTTCACCATTCAAACCTTCTTCAATTATACCATTGTTACAGGTTTCAAAGTGGCTTCCTTGTAATGAGTCTGTTATTAACCCTACAACGTGTATTAACCCTACAACGTGGGAAATTGCTGCTTTTAAACCACCGGAATCTCGTTTGTTGAATTTGAATCAGAAGGAGAAAAATATTAGTTGGATTTCCAAATATTCAAAAGATGCTAAAGCTGTATTCACTGCTTTCACTGTTAGTTTACTTTATAAATCGTCTTTGGCTGAACCTAAATCTATTCCATCTTCTTCTATGTATCCAACTCTTGAAGTTGGTGACCGTGTTTTAACAGAAAAGTTTTCTTTATTCTTTAGAAAGCCTCATGTTTCTGATATTGTTATTTTCAAACCTCCGCAATTTTTGAAGGAATTTGGTTATAGTTCATCTGATGTTTTTATAAAAAGGATTGTGGCTAAGGCTGGTGATGTTGTCCAAGTTAAGGGTGGAAAACTACTAGTGAATGGTGTTGCTGAACAAGAGGAATTTGTTTTAGAGCCTCTTGATTACGAGTTGGCTCCAATGGTTGTTCCAGCAGGACATGTGTTTGTAATGGGAGACAATCGTAACCAGAGTTTTGATTCTCATAACTGGGGTCCACTCCCGATCAAGAACATTGTTGGTAGATCGATGTTTCGCTACTGGCCTCCATCCAAAGAAGATCAAACTGTCATGGTTCATAACACCTCACCTTCCACGGCATAG 1035 0.4164 MAIRATFSFSGYVAQTLVSSASVRVANPRGVHECCILSRFFGSNQKPDLDRSSCGIGENFRRPKMSTYSTLAGDLLTEGLIWMMKSSAVVPGSSTGMMGISPFKPSSIIPLLQVSKWLPCNESVINPTTCINPTTWEIAAFKPPESRLLNLNQKEKNISWISKYSKDAKAVFTAFTVSLLYKSSLAEPKSIPSSSMYPTLEVGDRVLTEKFSLFFRKPHVSDIVIFKPPQFLKEFGYSSSDVFIKRIVAKAGDVVQVKGGKLLVNGVAEQEEFVLEPLDYELAPMVVPAGHVFVMGDNRNQSFDSHNWGPLPIKNIVGRSMFRYWPPSKEDQTVMVHNTSPSTA* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2061 344 CDD S26_SPase_I 187 319 IPR019533 GO:0004252|GO:0006465
Mtr2g2061 344 Pfam Signal peptidase, peptidase S26 168 325 IPR019533 GO:0004252|GO:0006465
Mtr2g2061 344 Gene3D Umud Fragment, subunit A 182 340 - -
Mtr2g2061 344 SUPERFAMILY LexA/Signal peptidase 185 331 IPR036286 -
Mtr2g2061 344 PANTHER THYLAKOIDAL PROCESSING PEPTIDASE 2, CHLOROPLASTIC-RELATED 1 335 - -
Mtr2g2061 344 PRINTS Bacterial leader peptidase 1 (S26A) family signature 184 200 IPR000223 GO:0006508|GO:0008236|GO:0016020
Mtr2g2061 344 PRINTS Bacterial leader peptidase 1 (S26A) family signature 243 255 IPR000223 GO:0006508|GO:0008236|GO:0016020
Mtr2g2061 344 PRINTS Bacterial leader peptidase 1 (S26A) family signature 287 306 IPR000223 GO:0006508|GO:0008236|GO:0016020
Mtr2g2061 344 TIGRFAM sigpep_I_bact: signal peptidase I 170 326 IPR000223 GO:0006508|GO:0008236|GO:0016020
Mtr2g2061 344 ProSitePatterns Signal peptidases I signature 3. 292 305 IPR019758 GO:0004252|GO:0016021
Mtr2g2061 344 ProSitePatterns Signal peptidases I serine active site. 193 200 IPR019756 GO:0004252|GO:0016021
Mtr2g2061 344 PANTHER SIGNAL PEPTIDASE I 1 335 IPR000223 GO:0006508|GO:0008236|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2061 Mtr-Chr2 30497466 30498874 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2061 196 326 MADS-box Gene Family AT1G29960 33.083 5.66e-13 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2061 K03100 - gmx:100802457 410.223