Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mtr2g2032 | ATGGAATGGGTCCACTTGATCTTCCATGTAATCCTAGTATTCCATTTATACACCATCGAAGCACAATCATTAGAAACAACAACCATATCAAGAGACAACTTAACCATCATGTTTGTTGGTTTTTTATCTGCCTTAATTTTAATGGCCTTGTTTGCACTCTTACTCCGCCATTGCTCATCCACCTCCTATAGTTACAACTGTAACCTAATCACCGATCTATTCCGCCGCGGATTCAACCGTCGAGTCATCAACAAGTGCCCTATCCTCGTTCACTCCACCGGTAAAACGACGCTTGAATGTGCCATTTGCCTAAATGAGTTTCAACACAACGATAAAATAAGGTTGCTTCCGAAATGTTATCATGTTTTTCACCGAGATTGTATTGATGTTTGGTTACTCTCTCACATGAATTGTCCTATTTGTCGCTCCAAACTCATCCCTAATGTTCCAGAATCAGAGCAGCAACAAGAACAAGAACATAGTAGCACCATTACGGTGCCAGGGGAAGTGGCATCGGCTGATAATAACGAGAATGTTATTGTCTCTCCACATTCAACGGATCATTCATTAGCGGAACATTGCGCCATTTAA | 591 | 0.4129 | MEWVHLIFHVILVFHLYTIEAQSLETTTISRDNLTIMFVGFLSALILMALFALLLRHCSSTSYSYNCNLITDLFRRGFNRRVINKCPILVHSTGKTTLECAICLNEFQHNDKIRLLPKCYHVFHRDCIDVWLLSHMNCPICRSKLIPNVPESEQQQEQEHSSTITVPGEVASADNNENVIVSPHSTDHSLAEHCAI* | 197 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mtr2g2032 | 196 | ProSiteProfiles | Zinc finger RING-type profile. | 100 | 142 | IPR001841 | - | |
Mtr2g2032 | 196 | PANTHER | RING FINGER DOMAIN-CONTAINING | 33 | 189 | - | - | |
Mtr2g2032 | 196 | SMART | ring_2 | 100 | 141 | IPR001841 | - | |
Mtr2g2032 | 196 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 78 | 149 | IPR013083 | - | |
Mtr2g2032 | 196 | SUPERFAMILY | RING/U-box | 99 | 148 | - | - | |
Mtr2g2032 | 196 | CDD | mRING-H2-C3H2C2D_ZSWM2 | 99 | 142 | - | - | |
Mtr2g2032 | 196 | Pfam | Ring finger domain | 99 | 142 | IPR001841 | - | |
Mtr2g2032 | 196 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE ATL31-LIKE | 33 | 189 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mtr2g2032 | Mtr-Chr2 | 29983074 | 29983783 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mtr2g2032 | 34 | 182 | Rapid Response to Elicitors | AT3G05200 | 33.929 | 1.31e-27 | 105 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mtr2g2032 | K10664 | - | cpap:110812438 | 112.079 |