Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2010 ATGGATGGGAACAAAGACGATGCATTGAAATCATTGAAAATCGGTAAAGAAGCTTTGGAAAAAGGCGATCGTAATCGCGCTTTGAAGTTTCTCAACAAAGCTCGCCGTCTCGACCCGACTCTTCCGATCGATGATCTGTTGTCCACTGTAAACAGCGATGCAGGTGATCATGCCACATCAGCTGAGGAGCCGGCGAAGAATTCATCCGATCAGCCTTCAATTCGTCGAAGGGCTGGCTCCGCTCCGGTGCCAGGGCCTTCGTCTTCGTCCTCAGTGTCTTATACTGAGGAGCAAGTTTCAATTATAAGGGAAATTAAGAGGAAGAAGAATTATTATGATATTTTAGGGGTGGAGAAGAGTTGTACTGTCGATGATGTGCGAAAATCGTATAGGAAGCTGTCTTTGAAGGTTCATCCGGATAAGAACAAAGCTCCTGGAGCCGAGGAAGCGTTTAAGTTGGTGTCTAAGGCTTTTCAGTGTCTTAGTAATGAGGAGAGTAAGAGGAAGTATGATGTTTCCGGAGAAGATGAAGTGGTTTATGAAAGGCGCGCTGCTGCGAGACCGGCTAGGGGATTTAATGGTTACTATGAGGCTGATGTTGATGCTGAAGAGATATTTAGGAATTTCTTCTTTGGAGGAATGGGAGGAATGGCGCCTGCTGGGAATTTCGGTGGGTTTAGTTTTGGTGGACCGGGGATGGCACATAGACAGGCTGCTGCTGATAATGGTTCCGGTGGATTCAATGTTCGTGCTTTGATTCAGTTACTTCCGGTGCTTCTCATTTTGCTTATTAACTTTTTGCCTTCGTCGGATCCGGTTTATGTTCTTTCGCAGAACTATCCTTATGAACACCGGCTTACCACACCTAAGAATGTTAACTATTATGTTAAGTCTACGAAGTTTGAACAAGATTATCCGTTGGGAAGCCGTGAACGAGCTACTATTGAGGAAAGGGTCGAGAGGGAATATTTTGGTATTCTTCGCCAGAATTGTCAGTTTGAGATGCAGCGGCGCCAATGGGGATATATCAGGGAAACGCCTCACTGTGATATGCTTCGGAAGTTTGATTCGGTCCGTTGA 1080 0.4565 MDGNKDDALKSLKIGKEALEKGDRNRALKFLNKARRLDPTLPIDDLLSTVNSDAGDHATSAEEPAKNSSDQPSIRRRAGSAPVPGPSSSSSVSYTEEQVSIIREIKRKKNYYDILGVEKSCTVDDVRKSYRKLSLKVHPDKNKAPGAEEAFKLVSKAFQCLSNEESKRKYDVSGEDEVVYERRAAARPARGFNGYYEADVDAEEIFRNFFFGGMGGMAPAGNFGGFSFGGPGMAHRQAAADNGSGGFNVRALIQLLPVLLILLINFLPSSDPVYVLSQNYPYEHRLTTPKNVNYYVKSTKFEQDYPLGSRERATIEERVEREYFGILRQNCQFEMQRRQWGYIRETPHCDMLRKFDSVR* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2010 359 ProSiteProfiles TPR repeat profile. 8 41 IPR019734 GO:0005515
Mtr2g2010 359 PRINTS DnaJ domain signature 112 130 IPR001623 -
Mtr2g2010 359 PRINTS DnaJ domain signature 130 145 IPR001623 -
Mtr2g2010 359 PRINTS DnaJ domain signature 146 166 IPR001623 -
Mtr2g2010 359 ProSitePatterns Nt-dnaJ domain signature. 151 170 IPR018253 -
Mtr2g2010 359 ProSiteProfiles dnaJ domain profile. 110 174 IPR001623 -
Mtr2g2010 359 Gene3D DnaJ domain 106 221 IPR036869 -
Mtr2g2010 359 SUPERFAMILY Chaperone J-domain 106 225 IPR036869 -
Mtr2g2010 359 PANTHER AT29763P-RELATED 1 357 - -
Mtr2g2010 359 MobiDBLite consensus disorder prediction 42 95 - -
Mtr2g2010 359 CDD DnaJ 110 163 IPR001623 -
Mtr2g2010 359 Pfam Domain of unknown function (DUF1977) 268 339 IPR015399 -
Mtr2g2010 359 SMART dnaj_3 109 166 IPR001623 -
Mtr2g2010 359 PANTHER - 1 357 - -
Mtr2g2010 359 MobiDBLite consensus disorder prediction 52 75 - -
Mtr2g2010 359 Pfam DnaJ domain 110 171 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2010 Mtr-Chr2 29368195 29369747 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2010 105 182 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 36.585 1.26e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2010 K09518 - gmx:100793797 509.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2010 2 29368195 29369747 Mtr2g2010 2 29368195 29369747 ECH