Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2006 ATGTCGTTGATTTATGAATGCGGTCCTTTTTGTAGTTGTCCTTTGCATTGCAGAAACCGTGTGACACAAAAAGGTATTAAATATAGGTTGGAAGTGTTTAGATCTAATGAAACTAGTTGGGGAGTTAGGTCTTTGGACCCTATTCTAGCTGGAACTTTTATATGTGAGTTCACCAGACTTGTTTTGACTAGGGAGCAAGCAGAAATTTTGACCATGGATGGTGAACATAACTCTTTGACTATATATCCAAATCGATTTTTGAATAGGTCTACTCAAGAATGGGGAGATTTGTCGATGATTGATGCTAATCATGTGCATCCCGCATATCCTACTTTACATTTTGCATTGGATGTATCAATGATGAGGAATGTTGCCAGCTATATTAGTCATAGCCCAACTCCAAATGTGTTTGTTCAATTAGTTCTCTTTGATAATGGTAATTGGATGTTTCCCCATCTTATGGTATTTGCAATGGAAAACATCCCTCCAATGAGAGAGCTTAGTCTTGATCATGGGGTAGAAGCTGGGTAG 531 0.3823 MSLIYECGPFCSCPLHCRNRVTQKGIKYRLEVFRSNETSWGVRSLDPILAGTFICEFTRLVLTREQAEILTMDGEHNSLTIYPNRFLNRSTQEWGDLSMIDANHVHPAYPTLHFALDVSMMRNVASYISHSPTPNVFVQLVLFDNGNWMFPHLMVFAMENIPPMRELSLDHGVEAG* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2006 176 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 2 174 - -
Mtr2g2006 176 SUPERFAMILY SET domain 3 174 IPR046341 -
Mtr2g2006 176 ProSiteProfiles SET domain profile. 28 172 IPR001214 GO:0005515
Mtr2g2006 176 Pfam SET domain 40 172 IPR001214 GO:0005515
Mtr2g2006 176 Gene3D SET domain 1 175 IPR046341 -
Mtr2g2006 176 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE FAMILY MEMBER SUVH2-RELATED 2 174 - -
Mtr2g2006 176 SMART set_7 28 173 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2006 Mtr-Chr2 29152165 29152695 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2006 3 173 Su(var)3-9 homologs AT1G73100 37.500 1.04e-29 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mtr2g2006 SET 3.1e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2006 K11420 - mtr:MTR_6g043960 345.895