Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mtr2g2005 | ATGGATCCACCACCACTTTGTCTTAATAATTGCAGTTCTGCTATAGACAAATTCTTGTGTCCAAAATGTTCTGATGATTGTCTCACTCTATCAGAAATTGAAGGTCTTATTCTTGGGTCATCTCCTTCTCAAAACTCAAGTATTTTAGAAATTGATTCCATTACTGTCACAGACACTACTGGCAAGAAGAATAACAATAGGTGCAAGACTTGCAACAAAAGAATTGGATTAACAGGATTCGAGTGTCGTTGTGGTGATGTATTTTGTGGAAGGCATAGGTATCCAGAAACACACTCTTGTAATGTTGATCTGAAAAGCATTGGTCGTCAAATTTTGGCTAAACAAAATCCAAAATGTGTCCTAAATAAACTAGAATTTAGGGTATAG | 387 | 0.3592 | MDPPPLCLNNCSSAIDKFLCPKCSDDCLTLSEIEGLILGSSPSQNSSILEIDSITVTDTTGKKNNNRCKTCNKRIGLTGFECRCGDVFCGRHRYPETHSCNVDLKSIGRQILAKQNPKCVLNKLEFRV* | 129 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mtr2g2005 | 128 | Pfam | AN1-like Zinc finger | 68 | 101 | IPR000058 | GO:0008270 | |
| Mtr2g2005 | 128 | SUPERFAMILY | AN1-like Zinc finger | 53 | 120 | IPR035896 | - | |
| Mtr2g2005 | 128 | Gene3D | - | 40 | 121 | IPR035896 | - | |
| Mtr2g2005 | 128 | PANTHER | AN1-TYPE ZINC FINGER PROTEIN | 4 | 128 | - | - | |
| Mtr2g2005 | 128 | SMART | AN1_Zf_4 | 68 | 105 | IPR000058 | GO:0008270 | |
| Mtr2g2005 | 128 | ProSiteProfiles | Zinc finger AN1-type profile. | 62 | 108 | IPR000058 | GO:0008270 | |
| Mtr2g2005 | 128 | PANTHER | ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 8-RELATED | 4 | 128 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mtr2g2005 | Mtr-Chr2 | 29035130 | 29035516 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mtr2g2005 | 51 | 125 | C2H2 Transcription Factor Family | AT3G52800 | 52.000 | 8.40e-24 | 88.6 |