Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1996 ATGGAAGATAAGAGAGTGAATATAATCGCTGCTATATCAGTGGTAACACTGATTATCATCATAATCATTGCACGTATTTTGTTAAAGCTGTCAAAGGCTTTCTTCCTCATCTGTGGCGCTGGCGTGGCTGTGATCCTTGCAGTATTTGGTTTTGTTTTTCTCAGCTTAATCTACAAACGCAGACGGAGAATATTGGAATCACAGTTGAAATCAGAAGGTCAAGAGATTCGAATAGAGTACAGTTTCTTAAGAAAGGTTGCAGGGGTTCCAACAAAGTTCAGATACAATGAGCTTGAGGAAGCAACAGATGGATTTCAATCACTTATTGGAAGAGGTTCTTCGGCTTCGGTTTTCAAAGGAATTCTCAATGATGGAACTTCGGTTGCTGTGAAAAGAATTGATGCAGAAGAAAGAGGAGCAAGAGAATTTAAATCAGAAGTTGCAGCTATAGCTAATGTTCATCATGTGAATCTTGTGAGACTTTTTGGGTATTGTAATTCTTCTTCAGCTCCTAGGTACCTTGTTTATGATTATGTATCAAATGGATCATTAGATTGTTGGATTTTCCCGAAAAGGGATTCGCAAAGGCGTCCACGTCCTGGTGGATGCTTGTCGTGGAACTTGAGGTATAAAGTTGCAATTGACGTTGCTAAAGGACTCGCATATCTTCACCACGATTGCAGATCAAGGATCTTACATCTTGATATAAAGCCAGAAAATATACTCTTGGATGAGACTTTTAGAGCACTTGTTTCAGATTTCGGCCTTGCAAAGTTAACTGGTAAAGACGAAAGTCAAGCGGTGTCTACAATAAGAGGAACAAGAGGTTATATGGCACCAGAATGGCTTTTAGAAAAGGGTATTTCAGATAAAACTGATGTATATAGTTACGGGATGGTTTTATTAGAGATTGTTGGAGGAAGAAAAAATGTGTGTTTGGTTGAAGACGAAAAGGACAAGTCAAAAAGGAAATGGCAATATTTTCCGAAGATTGTAAACGAGAAAGTGAAACAAGGGAAAATCATGGAAATTGTTGATCATAGGTTAATGGAATGTGGTGGTGTTGATGAGAGGGAGGTGATTAAATTGGTTTATGTTGCTTTATGGTGTGTGCAAGAGAAGCCAAGGTTGAGGCCTAGTATGGCTAGAGTGGTTGATATGCTTGAAGGGCGTGTGAGAGTGGATGAGCCACCAGGTACAAGAATGATTCTTGTTGATTTTCTCAGTGTTGATGATGATAATGTTACAGATAGTAATAACTTGCCAAGGTTGGACACTATGTCTAGTCAAGGAACACAAAGCAATGTGGAATGTAATTCTACCTACTCTTTTGCTACTACTGTTTTCTCTGGAAGATAG 1359 0.3893 MEDKRVNIIAAISVVTLIIIIIIARILLKLSKAFFLICGAGVAVILAVFGFVFLSLIYKRRRRILESQLKSEGQEIRIEYSFLRKVAGVPTKFRYNELEEATDGFQSLIGRGSSASVFKGILNDGTSVAVKRIDAEERGAREFKSEVAAIANVHHVNLVRLFGYCNSSSAPRYLVYDYVSNGSLDCWIFPKRDSQRRPRPGGCLSWNLRYKVAIDVAKGLAYLHHDCRSRILHLDIKPENILLDETFRALVSDFGLAKLTGKDESQAVSTIRGTRGYMAPEWLLEKGISDKTDVYSYGMVLLEIVGGRKNVCLVEDEKDKSKRKWQYFPKIVNEKVKQGKIMEIVDHRLMECGGVDEREVIKLVYVALWCVQEKPRLRPSMARVVDMLEGRVRVDEPPGTRMILVDFLSVDDDNVTDSNNLPRLDTMSSQGTQSNVECNSTYSFATTVFSGR* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1996 452 ProSiteProfiles Protein kinase domain profile. 103 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g1996 452 PANTHER RECEPTOR-LIKE KINASE 1 452 - -
Mtr2g1996 452 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 1 452 - -
Mtr2g1996 452 SMART serkin_6 103 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g1996 452 Gene3D Transferase(Phosphotransferase) domain 1 179 397 - -
Mtr2g1996 452 Pfam Protein kinase domain 107 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g1996 452 Gene3D Phosphorylase Kinase; domain 1 67 178 - -
Mtr2g1996 452 SUPERFAMILY Protein kinase-like (PK-like) 85 389 IPR011009 -
Mtr2g1996 452 ProSitePatterns Protein kinases ATP-binding region signature. 109 131 IPR017441 GO:0005524
Mtr2g1996 452 ProSitePatterns Serine/Threonine protein kinases active-site signature. 231 243 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1996 Mtr-Chr2 28927930 28929649 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1996 1 400 Receptor kinase-like Gene Family AT5G20050 64.179 7.77e-177 501
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Mtr2g1996 Pkinase 6.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1996 - - gmx:100791152 692.575
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4092 4 54899892 54901592 Mtr2g1996 2 28927930 28929649 PCT