Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1994 ATGGAAAAGAAAAAAGTTACGGTACCTCTTGTTTGTCACGGTCACTCTCGTCCAGTTGTTGATCTCTTTTACAGTCCTGTTACTCCTGATGGTTTCTTTCTTATCAGCGCAAGCAAAGATGCTAGCCCTATGCTGAGGAATGGAGAGACTGGAGATTGGATTGGAACATTTGAAGGGCATAAAGGTGCTGTTTGGAGTTGTTGTTTGGATGCTAATGCTTTGCGCGCTGCTACTGCTTCTGCTGATTTCTCAACCAAAGTTTGGGATGCATTAACAGGTGACGCGTTACATTCTTTTGAGCATAAGCACATTGTCAGAGCATGTGCTTTTTCTGAGGATACCCACCTTTTGCTCACTGGGGGAGCAGAGAAAATTCTCCGAATTTATGATTTGAATCGGCCTGATGCACCTCCTAAAGAAGTGGATAAATCCCCTGGTTCAGTCAGGAGTGTTGCATGGCTTCATAGCGACCAGACTATATTGAGTTCATGTACTGATATGGGAGGCGTCAGGCTATGGGATGTAAGAACTGGTAAAATTGTCCAGACACTTGACACCAAGTCGCCTATGACTAGTGCTGAAGTGAGTCAGGATGGTCGCTATATTACAACTGCCGATGGTTCTACTGTCAAGTTTTGGGATGCAAATCACTATGGATTGGTGAAGAGCTATGACATGCCTTGCAATGTGGAATCAGCTTCGTTAGAGCCCAAGTTTGGTAACAAGTTTGTTGCTGGGGGAGAAGACTTGTGGGTTCATGTTTTTGATTTCCATACGGGCGATGAGATTGCATGCAACAAAGGACATCATGGTCCTGTACACTGTGTCCGGTTCTCTCCTGGAGGAGAATCGTATGCATCAGGATCTGAGGATGGAACCATCAGAATATGGCAGACAGGGCCATTGGCTCATGATGAATCAGAGGGTTTATCACCAAATGGAACCCTGGAAAAGGAGAAGGCAAATGCAGAGGAGGAGGTTTCGCGCAGGATTGAGGGTTTTCATATTGCAGAGGAGGCCAAGTCCAAAGGAAAGGAAGAGGCGGAGGGATTATGA 1056 0.4574 MEKKKVTVPLVCHGHSRPVVDLFYSPVTPDGFFLISASKDASPMLRNGETGDWIGTFEGHKGAVWSCCLDANALRAATASADFSTKVWDALTGDALHSFEHKHIVRACAFSEDTHLLLTGGAEKILRIYDLNRPDAPPKEVDKSPGSVRSVAWLHSDQTILSSCTDMGGVRLWDVRTGKIVQTLDTKSPMTSAEVSQDGRYITTADGSTVKFWDANHYGLVKSYDMPCNVESASLEPKFGNKFVAGGEDLWVHVFDFHTGDEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGPLAHDESEGLSPNGTLEKEKANAEEEVSRRIEGFHIAEEAKSKGKEEAEGL* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1994 351 Pfam WD domain, G-beta repeat 95 130 IPR001680 GO:0005515
Mtr2g1994 351 Pfam WD domain, G-beta repeat 266 297 IPR001680 GO:0005515
Mtr2g1994 351 Pfam WD domain, G-beta repeat 54 89 IPR001680 GO:0005515
Mtr2g1994 351 SUPERFAMILY WD40 repeat-like 4 300 IPR036322 GO:0005515
Mtr2g1994 351 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT I 1 344 - -
Mtr2g1994 351 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 266 298 - -
Mtr2g1994 351 PANTHER OS02G0205400 PROTEIN 1 344 - -
Mtr2g1994 351 SMART WD40_4 177 214 IPR001680 GO:0005515
Mtr2g1994 351 SMART WD40_4 259 298 IPR001680 GO:0005515
Mtr2g1994 351 SMART WD40_4 134 174 IPR001680 GO:0005515
Mtr2g1994 351 SMART WD40_4 217 256 IPR001680 GO:0005515
Mtr2g1994 351 SMART WD40_4 92 130 IPR001680 GO:0005515
Mtr2g1994 351 SMART WD40_4 5 47 IPR001680 GO:0005515
Mtr2g1994 351 SMART WD40_4 50 89 IPR001680 GO:0005515
Mtr2g1994 351 ProSiteProfiles Trp-Asp (WD) repeats profile. 266 298 IPR001680 GO:0005515
Mtr2g1994 351 CDD WD40 14 298 - -
Mtr2g1994 351 MobiDBLite consensus disorder prediction 303 328 - -
Mtr2g1994 351 ProSiteProfiles Trp-Asp (WD) repeats profile. 57 98 IPR001680 GO:0005515
Mtr2g1994 351 ProSiteProfiles Trp-Asp (WD) repeats profile. 98 132 IPR001680 GO:0005515
Mtr2g1994 351 Gene3D - 9 324 IPR015943 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1994 9 296 Eukaryotic Initiation Factors Gene Family AT2G46290 29.448 3.62e-40 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1994 K13137 - gmx:100818422 632.484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g1994 2 28903939 28910262 Mtr2g1994 2 28903939 28910262 ECH