Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1989 ATGGAAATAGTTTCAGATTCTTCTTCTCCATCAAAGACAAAAGACATCGATGGCCTCCTCGCCAATGTCGGCTACAAAGTCCGATCATCTGAGCTACATCAAGTAGCTCAGAATCTCGAACGATTAGAAAGTGCGATCGTGAACTCATCCAGCGACATTTCTCAATTCGCTTCGGATACGGTCCACTATGATCCCTCCGACATTGGCAATTGGGTGGACAATCTCCTCTCCGAATTTGACCACACGGCCTCTTTACCCTACGATTTCTCTCAACTTCCAGATCTCTCAGCACCGCCGCCACAACACCACCACCACCAATCTTCTTCGACAGTTAATAATGTCGAAGAAGATTCTGCAATAAAACTTGTCCACATGCTGATGACCTGTGCAGATTCCGTGCAACGTGGTAATCTTTCATTGGCTGGCTCGCTAATCGAAGGCATGCAAGGGTTGTTGGCAAACATGAACACAAACTCCGGCATCGGAAAAGTCGCCGGATACTTCATCGACGCTTTGAACCGTCGCATCTTCGGTCAAAACAATGTTAGCCACCAAGTTTCTCTTTACGAGAACGATGTTCTTTACCATCACTACTACGAAGCTTGTCCATACCTCAAATTCGCACATTTCACCGCAAATCAAGCTATACTCGAAGCTTTCAACGGCCACGATTGTGTCCACGTCATTGATTTCAACCTCATGCATGGTCTTCAATGGCCAGCGTTAATTCAAGCTCTTGCTCTTCGTCCTGGCGGACCTCCGTTTCTCCGGCTTACCGGCATTGGTCCGCCGTCGCCGGATGACCGTGACAACCTCCGTGAAATCGGCCTCCGTCTCGCTGAACTTGCACGCTCCGTTAACGTTAGATTCGCCTTTCGCGGCGTTGCTGCGTGGCGGCTTGAAGATGTGAAGCCATGGATGCTTCAGGTGAGTTCTAAAGAAGCTGTGGCGGTTAATTCTATTTTTCAGCTTCATCGTCTTCTCGGATCTGAATCCGACTCGAATTATCATTCGGGTATTGAAATGGTTTTGGGTTGGATCCGGAGTTTGAATCCGAAAATCGTTACAGTTGTTGAACAAGAAGCGAACCATAACGAGAACGGGTTTATGGAACGGTTCACGGAGGCATTGCATTATTACTCGACCGTTTTTGACTCGCTTGAAGCGTGTCCGGTTGAACCAGATAAAGCTATGGCCGAGATGTATTTACAAAGAGAGATATGCAACGTGGTGTGCTGCGAAGGACCTGCTCGAGTTGAGAGACATGAACCGTTGGTTAAGTGGAAGGAGCGGCTTGGTAAAGCCGGGTTCAGACCGTTGCATTTGGGTTCGAATGCTTTTAAGCAAGCGAGTATGTTGTTGACTCTGTTTTCAGCGGAGGGTTATTGCGTGGAAGAGAATCAAGGTAGCTTGACTTTGGGTTGGCATAGCCGGCCTTTGATTGCGGCTTCGGCTTGGCAAGCTGTGCCTTTGTTAGATGCTGAAACACTGCGTTTTGATTGTTGA 1506 0.4801 MEIVSDSSSPSKTKDIDGLLANVGYKVRSSELHQVAQNLERLESAIVNSSSDISQFASDTVHYDPSDIGNWVDNLLSEFDHTASLPYDFSQLPDLSAPPPQHHHHQSSSTVNNVEEDSAIKLVHMLMTCADSVQRGNLSLAGSLIEGMQGLLANMNTNSGIGKVAGYFIDALNRRIFGQNNVSHQVSLYENDVLYHHYYEACPYLKFAHFTANQAILEAFNGHDCVHVIDFNLMHGLQWPALIQALALRPGGPPFLRLTGIGPPSPDDRDNLREIGLRLAELARSVNVRFAFRGVAAWRLEDVKPWMLQVSSKEAVAVNSIFQLHRLLGSESDSNYHSGIEMVLGWIRSLNPKIVTVVEQEANHNENGFMERFTEALHYYSTVFDSLEACPVEPDKAMAEMYLQREICNVVCCEGPARVERHEPLVKWKERLGKAGFRPLHLGSNAFKQASMLLTLFSAEGYCVEENQGSLTLGWHSRPLIAASAWQAVPLLDAETLRFDC* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1989 501 MobiDBLite consensus disorder prediction 90 112 - -
Mtr2g1989 501 Pfam Transcriptional regulator DELLA protein N terminal 17 83 IPR021914 -
Mtr2g1989 501 ProSiteProfiles GRAS family profile. 113 487 IPR005202 -
Mtr2g1989 501 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 11 491 IPR005202 -
Mtr2g1989 501 Gene3D - 15 79 IPR038088 -
Mtr2g1989 501 Pfam GRAS domain family 122 487 IPR005202 -
Mtr2g1989 501 PANTHER OS05G0574900 PROTEIN 11 491 - -
Mtr2g1989 501 SMART DELLA_2 17 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1989 Mtr-Chr2 28580386 28582528 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1989 16 487 GRAS Transcription Factor Family AT1G14920 48.544 3.17e-163 471
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mtr2g1989 GRAS 1.9e-126 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1989 K14494 - gmx:100805968 774.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g1989 2 28580386 28582528 Mtr2g1989 2 28580386 28582528 ECH