Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1978 ATGGCTCCTCCATGGGTTCAAGAACTCCCTCTCAATCCTTTGAATATTCCAGTCACCATTATCAACACATTCTCCGTTACTCCATCGAAGCCTATTCCTGTCAAACCAGGTGACTGTTTATATCTTTCAAACCTCGATGACGTGATTGGAGCACGCGTCTTCACACCGACGGTTTACTTTTATCAATCAGACAATTCAAGTACGTCTTTCCAAAAACCGGTCGCGGAAATACTTGGCCGCGCTCTAGCTGACGTTTTGGTTCCCTACTACCCTCTCTCGGGAAGGTTAAGAGAGACGAAAAATGGTAAACTGGAAGTATTTTTCGGAGAAGAAGAAGAACAAGGAGCGTTAATGGTTGAAGCAAGATCAAACATAGCTTTATCTGAACTAGGTGATTTTGCTGCTCCAAATCCATCTTGGGAACCATTGATATTCAAATTTCCAAATGAAGAACAATACAAAGTGTTGGAAATGCCACTTGTTATAGCTCAGGTAACAATCTTCACATGTGGTGGATTTAGCCTCGGTTTACGCCTTTGTCATTGTATCTGTGATGGAATGGGAGCTATGCAGTTTCTAGGAGCATGGGCTGCAACAGCAAAAACAGGAAAATTGGTTACAGAACCTGAACCTTGTTGGAACAGAGAGATTTTCAAGCCACGTGATCCACCAGAAGTGAAATTTCCACATATGGAGTTCATGAGAATTGATGAAGGATCAAACTTAACAATGAAACTTTGGAAAACAAAGCCCGTTCAGAAGTGTTATCGCATAAGACGCGAGTTTCAAAACCAGTTGAAATCACTTGCTCAACCATTTGATTCTGCTGGTTGCACTACATTTGATGCAATGGCTGCACATATTTGGAGATCATGGGTTAAAGCTCTTGATGTTAAGCCGCAAGATTACGAATTAAGGTTAACATTTTCAGTTAATGCTAGACAGAAGCTTAAAAATCCACCATTGAAAGAAGGGTTTTATGGTAATGTGGTTTGTATTGCTTGCACAACAAGTAAGGTTTCTGATCTTGTGAATGGAAAATTACCAGAGACTACCCTTTTGGTTCGTGAAGCTCGACAAAGTGTAACAGAGGAATATTTGAGATCAACTGTTGATTATGTTGAAGTTGATAGGCCAAAGCAACTTGAGTTTGGTGGTAAACTTACAATTACTCAATGGACAAGATTTTCTATTTATAATTGTTCTGATTTTGGATGGGGTAAGCCAATTTATGCTGGTCCTATTGATTTAACACCTACACCTCAAGTTTGTGTATTTTTACCTGAAGGAGAAGGCGATTCTAGTGGTGGTTCTATGATTGTTTGCATTTGCTTGCCTGAATCTGCTGCGAACAAGTTTACACAAGCCTTACTTATTGATTCAGTGTTGTTGACATAG 1398 0.3991 MAPPWVQELPLNPLNIPVTIINTFSVTPSKPIPVKPGDCLYLSNLDDVIGARVFTPTVYFYQSDNSSTSFQKPVAEILGRALADVLVPYYPLSGRLRETKNGKLEVFFGEEEEQGALMVEARSNIALSELGDFAAPNPSWEPLIFKFPNEEQYKVLEMPLVIAQVTIFTCGGFSLGLRLCHCICDGMGAMQFLGAWAATAKTGKLVTEPEPCWNREIFKPRDPPEVKFPHMEFMRIDEGSNLTMKLWKTKPVQKCYRIRREFQNQLKSLAQPFDSAGCTTFDAMAAHIWRSWVKALDVKPQDYELRLTFSVNARQKLKNPPLKEGFYGNVVCIACTTSKVSDLVNGKLPETTLLVREARQSVTEEYLRSTVDYVEVDRPKQLEFGGKLTITQWTRFSIYNCSDFGWGKPIYAGPIDLTPTPQVCVFLPEGEGDSSGGSMIVCICLPESAANKFTQALLIDSVLLT* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1978 465 Gene3D - 240 457 IPR023213 -
Mtr2g1978 465 Pfam Transferase family 17 455 - -
Mtr2g1978 465 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 12 458 - -
Mtr2g1978 465 PANTHER F21B7.2 12 458 - -
Mtr2g1978 465 Gene3D - 15 235 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1978 Mtr-Chr2 27624059 27625578 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1978 21 458 Monolignol Biosynthesis Gene Families AT5G48930 30.735 1.44e-56 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1978 K15400 - gmx:100802814 811.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g1978 2 27624059 27625578 Mtr2g1978 2 27624059 27625578 ECH