Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1945 ATGGAGTTCAAAAAGGCCAAACTAGTAAGATTCTACTCGGATGTGAAAAGGGTTAAAGAAGAAGGAACAAAGGTATCAAAATCATACAAGGTATTCCCAGAGGAACATGAACCATGGCGTAAAAGAATACTTGACCCTGGTAGCCAGATTGTGTTAAAATGGAATCGTCTCTTTATAGTTTCTTGCTTGTTAGCTCTTTTTGTTGATCCCTTGTACTTTTATTTGCCTATTGTCCAAACAACACAACGACCCTCTTCTTCCTGTCTGAAGACTGACCTGACATTACAGATTATTGTCACCTTTCTTCGCACTATTGCCGATGTCTTTTATCTATTGCATCTCATCATTAAGTTTAGGACTGCGTATGTCGCGCCCAGCTCGAGGGTATTTGGAAGGGGTGAACTTGTCATGGACCCTGCTAAAATTGCTAGGAGATATATCAGATCTCACTTCTTCATTGATTTTATTGCAACACTACCTTTACCGCAGATGCTCATCTGGTTTATCATACCCGCTACACGGACACCTCAGACCGATCACAACAATAATGCTCTTGCATTCATTGTCTTGCTTCAATATCTTCCAAGATTATATTTGATTTTTCCGTTAAGTTCTCAAATAATCAAAGCAACCGGTGTAGTTACAAAGACTGCTTGGGCAGGAGCTGCATATAATTTGATATTGTACATGTTGGCTAGCCATGTTTTAGGGGCATCCTGGTATCTTCTATCTGTTGATCGTTATACTACTTGTTGGAAATCCTTATGCAAAAAGGAACGTAGCCCTCACAGTTGCTTTCTCTACCTCGACTGCAGTTCTTTGAATAATGATACGCGCAAGATATGGGTTAATACTACAGATGTGTTTAACAGATGTGACCCCAGTAATGATGACATTCAGTTCAAGTATGGATTATTCGAAAATGCATTAACAAAACATGTTGTCTCTTCAAACTTCATATCAAAATACTTATATTGTTTATGGTGGGGGCTGCAGCAATTAAGTTCTTACGGACAGAACCTTGATACGACCACATTTATTGGAGAAACGTCATTTGCTATTGTGATTGCCATCTTGGGTCTTGTATTATTTGCTCATTTGATTGGGAACATGCAGACATATTTACAATCAATTACTATAAGGCTTGAAGAGTGGAGGCTAAAGCGAAGAGACACAGAGGAGTGGATGGGACATCGCCAACTCCCTGAAGATTTGAGATTTCGTGTTAGACGATTTGTACAATATAAATGGCTTGCAACTCGTGGTGTTGATGAAGAAACCATTCTACGTTCATTGCCAACCGATCTTCGTCGTGATATCCAGCGCCACCTATGCTTAGACCTTGTTAGACGAGTTCCCTTCTTCTCACAAATGGATGATCAGCTTCTTGATGCGATATGTGAGCGGCTGGTATCTTCTCTAAGCACTCTAGGCACCTACATTGTTCGTGAGGGTGACCCTGTAACTGAAATGTTGTTTATCATTAGAGGCAGACTAGATAGTTCTACAACAAATGGTGGCCGGACTGGTTTCTTCAACTCAATCATATTGAGACCTGGAGATTTTTGTGGTGAGGAACTACTTTCTTGGGCACTACTCCCAAAATCAACCATGAATTTGCCGTCTTCAACTAGGACGGTTAAAGCCTTAAGTGAGGTTGAAGCTTTTGCTCTTCGAGCTGAAGACTTAAAGTTTGTTGCTAACCAATTTAGGCGCCTCCACAGCAAAAAGCTGCAGCACACCTTTCGATTTTACTCTCACCATTGGAGGACTTGGGCCGCTTGTTTTATACAAGCTGCTTGGCGTCGATATAAGAAAAGGATGTCTGCCAAAGATCTCGGTTTGAGGGAATCTCTTTCGTTCGATGAGACAGTGGCCAGCGAGAGAGCGCATGTAGAGGAGGAATATCCTACTGGTTCAAACTCGTCTCAGGCTAAATTGAATCTTGGGGTTACAATACTTGCTTCGAGGTTTGCTGCTAACGCACGAAGAGGAGCACTAAAGATGAAAGATGATTTGCCTAAGCTACTGAAGCCTGAAGAACCTGACTTCTCCACCGAAGCAGATGATGATTAG 2076 0.4152 MEFKKAKLVRFYSDVKRVKEEGTKVSKSYKVFPEEHEPWRKRILDPGSQIVLKWNRLFIVSCLLALFVDPLYFYLPIVQTTQRPSSSCLKTDLTLQIIVTFLRTIADVFYLLHLIIKFRTAYVAPSSRVFGRGELVMDPAKIARRYIRSHFFIDFIATLPLPQMLIWFIIPATRTPQTDHNNNALAFIVLLQYLPRLYLIFPLSSQIIKATGVVTKTAWAGAAYNLILYMLASHVLGASWYLLSVDRYTTCWKSLCKKERSPHSCFLYLDCSSLNNDTRKIWVNTTDVFNRCDPSNDDIQFKYGLFENALTKHVVSSNFISKYLYCLWWGLQQLSSYGQNLDTTTFIGETSFAIVIAILGLVLFAHLIGNMQTYLQSITIRLEEWRLKRRDTEEWMGHRQLPEDLRFRVRRFVQYKWLATRGVDEETILRSLPTDLRRDIQRHLCLDLVRRVPFFSQMDDQLLDAICERLVSSLSTLGTYIVREGDPVTEMLFIIRGRLDSSTTNGGRTGFFNSIILRPGDFCGEELLSWALLPKSTMNLPSSTRTVKALSEVEAFALRAEDLKFVANQFRRLHSKKLQHTFRFYSHHWRTWAACFIQAAWRRYKKRMSAKDLGLRESLSFDETVASERAHVEEEYPTGSNSSQAKLNLGVTILASRFAANARRGALKMKDDLPKLLKPEEPDFSTEADDD* 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1945 691 Gene3D - 58 379 - -
Mtr2g1945 691 SUPERFAMILY cAMP-binding domain-like 384 576 IPR018490 -
Mtr2g1945 691 PRINTS EAG/ELK/ERG potassium channel family signature 114 123 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mtr2g1945 691 PRINTS EAG/ELK/ERG potassium channel family signature 231 241 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mtr2g1945 691 PRINTS EAG/ELK/ERG potassium channel family signature 349 360 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mtr2g1945 691 PRINTS EAG/ELK/ERG potassium channel family signature 367 376 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mtr2g1945 691 PRINTS EAG/ELK/ERG potassium channel family signature 417 424 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mtr2g1945 691 Pfam Cyclic nucleotide-binding domain 478 565 IPR000595 -
Mtr2g1945 691 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 14-RELATED 18 688 - -
Mtr2g1945 691 Gene3D Helix hairpin bin 382 445 - -
Mtr2g1945 691 SMART cnmp_10 454 585 IPR000595 -
Mtr2g1945 691 Gene3D Jelly Rolls 452 572 IPR014710 -
Mtr2g1945 691 ProSiteProfiles cAMP/cGMP binding motif profile. 454 584 IPR000595 -
Mtr2g1945 691 CDD CAP_ED 454 585 IPR000595 -
Mtr2g1945 691 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 18 688 - -
Mtr2g1945 691 SUPERFAMILY Voltage-gated potassium channels 47 376 - -
Mtr2g1945 691 Pfam Ion transport protein 54 380 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mtr2g1945 691 MobiDBLite consensus disorder prediction 670 691 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1945 Mtr-Chr2 26116480 26122684 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1945 1 690 Ion Channels AT4G30360 69.061 0.0 994
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1945 K05391 - gmx:100808425 1181.01