Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1922 ATGCTAGATTCGGGGAACTTAGCACCGTCTCCGCCTCTCTCGGCACCATGCTCCGTTACGGATGCTGCCCCCGCTGCCCCCAATGCCGCCTCTGGTTCTTCTGACAATGGCTCCTCTGCCTATGCTAGGGTTTTAAAGAGGACTCGGGGTTCTCTCCGTAAAACAGACAAACACAAGAGTTTGTGGGATCGCCTTACAGATCCTCAATCTCTTCCTTTTCTCGTTGCTGCTTCGAAGATGGTTGAATGTTGTTTCTGCCACCATGCTTTGTGTCCTGAGGATGAGCTGTTGTGTTCTGTTCGTGGATGTGCTGCTCGCTATCATAAAGAATGTGCTAAACAAGCTGTTGGGGTTTCAAATCTCAAGAAATTCAAGTGTCCGCAACATGTGTGCTTCATTTGCAAGCAAAAGTTGAATTTGTTGCGGTGTGTCCGTTGCACGGTGGCTTTCCATACTAAATGTGCACCATGGCCAGAAGCCGTGATCCGTCTGGAAGATCATCCTGGGCAAGCTGTTTGTTGGAGACATTCTGATTGGCGCCTGGACAAAAAGGAGCAGCCTGATACTTCAACAAGTGACATTTCGGAAGTATTTTGTCGTTTGCCTCTTCCTTTTGCTAACGAGGAATTCAAGATTGACTTCACTTGGAAAGACATGGACAATAAGATGGAGCCACCACCATACACACACATAAGGCGCAACATGTACCTAGTGAAGAAAAAGCGTAGTGATGTTGATGATGATGTTGGGTGCACCAACTGCAGTTCTACTTGCTCTAATGATTGTGTATGCAGGGTTCAATGCATAAGCTGCTCAAAGGCTTGTCGGTGCTCTGAAAATTGTAGTAATCGGCCATTTCGAAGGGAAAAACAAATCAGGATTGTCAAGACTGAGTTTTGTGGATGGGGAGTTGAGGCTGTTGAAACAATTGAGAAAGGAGAGTTTATAATTGAGTATATTGGAGAAGTTATTGATGATGCTTTATGTGAACAAAGGCTTTGGGACATGAAATATAAGGGTGTGCAGAATTTTTATATGTGTGAGATTCGGAAAGACTTCACAATAGATGCAACTTTCAAAGGAAATACATCACGCTTTTTAAACCATAGCTGTGATCCGAATTGTGTTTTGGAGAAGTGGCAAGTAGATGGTGAAACACGCATTGGTGTATTTGCTGGTCGTTCAATAGAAGTTGGAGAGCCATTGACATACGATTACAGATTTGTGCAATTTGGTGCAGAGGTTAAGTGCTGCTGCGGTTCCCCAAAATGTCAAGGATTTCTAGGTTCAAAAAAGAAAATTGGCAAAGTAATAAACCTCTGTTGGGGCGCAAAACGTAAGCGAACTTCTTGCCCTAGGGCAGCAAATGCTGCTGATTTGCCAAAGTATTATATGTAG 1398 0.4413 MLDSGNLAPSPPLSAPCSVTDAAPAAPNAASGSSDNGSSAYARVLKRTRGSLRKTDKHKSLWDRLTDPQSLPFLVAASKMVECCFCHHALCPEDELLCSVRGCAARYHKECAKQAVGVSNLKKFKCPQHVCFICKQKLNLLRCVRCTVAFHTKCAPWPEAVIRLEDHPGQAVCWRHSDWRLDKKEQPDTSTSDISEVFCRLPLPFANEEFKIDFTWKDMDNKMEPPPYTHIRRNMYLVKKKRSDVDDDVGCTNCSSTCSNDCVCRVQCISCSKACRCSENCSNRPFRREKQIRIVKTEFCGWGVEAVETIEKGEFIIEYIGEVIDDALCEQRLWDMKYKGVQNFYMCEIRKDFTIDATFKGNTSRFLNHSCDPNCVLEKWQVDGETRIGVFAGRSIEVGEPLTYDYRFVQFGAEVKCCCGSPKCQGFLGSKKKIGKVINLCWGAKRKRTSCPRAANAADLPKYYM* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1922 465 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR3 69 453 - -
Mtr2g1922 465 CDD SET_ASHR3-like 291 429 - -
Mtr2g1922 465 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 76 180 IPR013083 -
Mtr2g1922 465 MobiDBLite consensus disorder prediction 1 38 - -
Mtr2g1922 465 ProSiteProfiles AWS domain profile. 247 290 IPR006560 GO:0005634|GO:0018024
Mtr2g1922 465 PANTHER SET DOMAIN PROTEINS 69 453 - -
Mtr2g1922 465 Gene3D SET domain 206 439 IPR046341 -
Mtr2g1922 465 SUPERFAMILY SET domain 201 419 IPR046341 -
Mtr2g1922 465 Pfam SET domain 301 406 IPR001214 GO:0005515
Mtr2g1922 465 ProSiteProfiles SET domain profile. 290 407 IPR001214 GO:0005515
Mtr2g1922 465 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 461 IPR025787 -
Mtr2g1922 465 ProSiteProfiles Post-SET domain profile. 413 429 IPR003616 -
Mtr2g1922 465 SMART set_7 290 413 IPR001214 GO:0005515
Mtr2g1922 465 SMART PHD_3 82 130 IPR001965 -
Mtr2g1922 465 SMART PHD_3 131 177 IPR001965 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1922 Mtr-Chr2 24268550 24278989 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1922 271 428 C2H2 Transcription Factor Family AT2G23740 34.078 2.78e-21 95.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mtr2g1922 SET 9.4e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1922 - - aprc:113859744 690.649