Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1921 ATGTCGTCAAGCACGCAGGTGGTTGTTCTAGACAACGGCGGAGGACTAATAAAAGCCGGTTTCGGCGGCGAACGCGACCCATCAACCATACTCCCCAACTGTCTCTATAAACCCCTCACCTCCAAAAAATGGCTGCACCCAAACCCTATCAACACCCCTTCCTCCTCCTCCTCCTCCTCCTCCTCCGAACAAGACCTCACCTCCGCCTCCGTCCGCCGCCCCATCGATCGCGGCTACCTAATCAACCCCGACCTCCAACGCGATATCTGGTCCCACCTTTTCACCTCTATCCTCCGCATCAACCCTTCTCAATCCTCTCTCCTCCTCACTCAACCCCTCTTCACTCTCCCTTCCATTCAACACTCTCTCCACCAACTCGTCTTCGAAGATTTCAATTTTTCCTCTCTCTTCGTTGCTGATTCACCTTCCCTTGTTCATCTCTACGAAACTAGCCAACGTCCCAATGGCCTTCTCTCTAAAGCCCAATGCAGTCTCGTTGTTGATTCTGGCTTTTCCTTCACACACGCTTCGCCTGTCTTTCAGAACTTTACTCTTAACTACGCTGTTAAGCGTATCGATTTAGGTGGTAAAGCCTTGACCAATTACCTCAAGGAACTTATTTCCTTTCGTTCTGTTAATGTCATGGATGAAACTTTTATTATTGATGATGTTAAGGAGAATCTCTGCTTTGTTTCTGTTGATGTCGACAAACACCTTAACCTTGCTAGAAAGAGTGGGAAAGACAATGTTTTCAAGTGTACGTATGTTCTTCCTGATGGTGTTACGCACACAAAAGGGTTTGTTAAATATCCAGAACAAGCAAGCAGGTATCTTGCTGATGGTAAGGACGATATCGGTGATCACGAGGAGATTTCTAAACAACAACCTCAGGACAATAGACACAAAGTTGATTTGACAAAAAATGAATTTGATTTGACGAATGAGCGGTTTCTTGTCCCCGAGATGATCTTCCGTCCAGCTGATTTGGGAATGAACCAGGCTGGGCTACCAGAATGCATTGTACGAGCAGTTAATGCCTGTCATCCGCATCTCCATCCTGTACTCTATGAAAGCATCATTTTAACCGGTGGAAGCACCTTGTTTCCTCATTTTGCCGAGAGATTAGAGAAGGAGCTTCGGCCTCTAGTTCCTGATGACTATCGTGTGAAGATAGCTACACAAGAAGATCCCCTACTAGGTGTTTGGCGTGGAGGATCTCTCCTGGCATCGAGTCCAGACTTTGATGCGATGTGTGTGACCAAGGCTGAGTATGAGGAGCTTGGTTCTGCTAGATGTCGCAAGAGATTTTTTCATTGA 1317 0.4677 MSSSTQVVVLDNGGGLIKAGFGGERDPSTILPNCLYKPLTSKKWLHPNPINTPSSSSSSSSSEQDLTSASVRRPIDRGYLINPDLQRDIWSHLFTSILRINPSQSSLLLTQPLFTLPSIQHSLHQLVFEDFNFSSLFVADSPSLVHLYETSQRPNGLLSKAQCSLVVDSGFSFTHASPVFQNFTLNYAVKRIDLGGKALTNYLKELISFRSVNVMDETFIIDDVKENLCFVSVDVDKHLNLARKSGKDNVFKCTYVLPDGVTHTKGFVKYPEQASRYLADGKDDIGDHEEISKQQPQDNRHKVDLTKNEFDLTNERFLVPEMIFRPADLGMNQAGLPECIVRAVNACHPHLHPVLYESIILTGGSTLFPHFAERLEKELRPLVPDDYRVKIATQEDPLLGVWRGGSLLASSPDFDAMCVTKAEYEELGSARCRKRFFH* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1921 438 Gene3D Actin; Chain A, domain 2 35 74 - -
Mtr2g1921 438 MobiDBLite consensus disorder prediction 47 70 - -
Mtr2g1921 438 SMART actin_3 5 437 IPR004000 -
Mtr2g1921 438 Gene3D Actin; Chain A, domain 4 200 335 - -
Mtr2g1921 438 Gene3D - 8 429 - -
Mtr2g1921 438 PANTHER ACTIN 8 434 IPR004000 -
Mtr2g1921 438 SUPERFAMILY Actin-like ATPase domain 162 437 IPR043129 -
Mtr2g1921 438 Pfam Actin 4 437 IPR004000 -
Mtr2g1921 438 PANTHER ACTIN-RELATED PROTEIN 6 8 434 IPR030054 GO:0005634|GO:0006338
Mtr2g1921 438 SUPERFAMILY Actin-like ATPase domain 3 145 IPR043129 -
Mtr2g1921 438 MobiDBLite consensus disorder prediction 47 69 - -
Mtr2g1921 438 Gene3D - 139 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1921 Mtr-Chr2 24228056 24231642 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1921 6 437 Cytoskeleton Gene Families AT3G18780 28.802 3.36e-60 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1921 K11662 - gmx:100819827 687.567