Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1914 ATGGCAGGAATGCTTCCAGGAGTTGAATCAGCTAGAAGAAGACGTGTCCATAAGTGTGGAGGATTTTCTGATTCACCATCTTTTTCTTCTCATAACACCTCAAGACGTTCTTCTTTTTGTTTGTATGCAAGTAACCATGAATCTCGTATTTCCTCATCTTCTTCAATGCAAAGAAATATATTATACCAGTCACACCAAGATGAGAATATGGTAGGAGCAGCTAGAGCAGCCAAACAAAGATTGGATGACAAATTCAGATCACAAAGGGTATCAGAAAACATAAGGAAAAAGAACATGAAGTGTGTGGAAGGTAGAAAAGAAAGCATAGAAGAGTTACAAAGTGAGGTATATGGGACAAAGAAAAGTGGTCCAAGGAAGTTCAGTTGGAGCAAATTGAGCTGGAAAGCATCAGAACAAGAGGATTGTGCTGTGTGTTTGGAATCATTTAAGATTGGAGACAAATTGATTCCTTTACCTTGTGCACACAAGTTCCATTCCACATGCTTGAAGCCTTGGTTAGAAAATAATTCACACTGTCCATGTTGTAGAACTACCATTCTTTCCCTCTAG 570 0.3877 MAGMLPGVESARRRRVHKCGGFSDSPSFSSHNTSRRSSFCLYASNHESRISSSSSMQRNILYQSHQDENMVGAARAAKQRLDDKFRSQRVSENIRKKNMKCVEGRKESIEELQSEVYGTKKSGPRKFSWSKLSWKASEQEDCAVCLESFKIGDKLIPLPCAHKFHSTCLKPWLENNSHCPCCRTTILSL* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1914 189 ProSiteProfiles Zinc finger RING-type profile. 142 183 IPR001841 -
Mtr2g1914 189 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 185 - -
Mtr2g1914 189 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 105 188 IPR013083 -
Mtr2g1914 189 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 1 185 - -
Mtr2g1914 189 SUPERFAMILY RING/U-box 131 187 - -
Mtr2g1914 189 SMART ring_2 142 182 IPR001841 -
Mtr2g1914 189 Pfam Ring finger domain 141 183 IPR001841 -
Mtr2g1914 189 MobiDBLite consensus disorder prediction 1 34 - -
Mtr2g1914 189 CDD RING-H2_PA-TM-RING 141 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1914 Mtr-Chr2 23832934 23834264 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1914 137 186 C3H Transcription Factor Family AT1G49850 62.000 3.62e-17 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1914 - - gmx:100527583 270.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g1914 2 23832934 23834264 Mtr2g1914 2 23832934 23834264 ECH