Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1897 ATGTGGAATCCATTATCATGGGTCATGGAGGCAGCTGCAATCATGGCCATTGTATTGGCCAATGGAGGGGGAAAACCACCGGATTGGCAAGATTTCACTGGTATTATGGTGTTGCTTATCATTAACTCAACGATTAGTTTCATTGAGGAAAACAATGCTGGAAATGCTGCAGCTGCTTTGATGGCCGGTCTTGCCCCAAAAACCAAGGTGTTGAGGGATGGAAAATGGAGTGAGCAAGAGGCAGAAATTTTGGTGCCGGGAGATGTGATCAGTATCAAGTTGGGAGACATTGTCCCAGCTGATGCCCGTCTTTTGGAAGGAGATCCCTTAAAGATTGACCAGTCTGCCCTTACTGGTGAGTCCTTGCCAGTAACAAGGAACCCTGGTCAAGAGGTCTTCTCTGGTTCAACTTGCAAGCAAGGTGAAATCGAGGCTATTGTCATTGCCACTGGTGTCCACACCTTCTTTGGGAAGGCTGCACACCTTGTTGATAGCACCAACAATGTTGGTCACTTCCAAAAGGTGTTGACATCCATTGGTAACTTCTGTATCTGCTCAATTGCTGTGGGAATGGTGATTGAAATCATTGTGATGTATCCCATCCAAAATAGAGCTTACAGAGATGGTATTGACAACTTGTTGGTTCTTCTCATTGGAGGTATCCCAATTGCTATGCCAACTGTCTTGTCTGTGACCATGGCTATTGGATCTCACCGCCTTTCTCAGCAAGGAGCTATCACCAAGAGGATGACAGCCATCGAAGAAATGGCAGGAATGGATGTTCTATGCAGTGACAAGACTGGAACTCTCACTCTTAACAAGCTTACTGTGGACAAGAACTTGATTGAGGTCTTCCCTACTGATATGAACAAGGACAGTGTTGTTCTATATGCAGCAAGAGCTTCACGAGTCGAAAACCAGGATGCCATTGATGCATCAATTGTGAATATGTTGAGCGATCCCAAGGAGGCAAGAGCAGGAATCACTGAGGTGCATTTCTTGCCCTTTAATCCTGTGGACAAGCGCACAGCTATTACCTTTATTGACGGAAATGGCAACTGGCACAGAAGCAGCAAAGGTGCTCCTGAACAAATTATTGAACTCTGTGGACTTAAGGGAGAGACTTTGAAAAGGGCACACAAAACCATCGATGAGTATGCTGAGCGCGGTCTGCGTTCCTTGGCTGTTGGTTTCCAGACTGTTTCAGAAAAGACCAAGGAGAGTGCAGGAGAACCATGGGTGTTCTTGGGTCTCTTACCCCTCTTTGACCCGCCTAGACATGACAGTGCTGAGACTATTCGTCGCGCTCTTGACCTCGGTGTCAATGTTAAGATGATCACTGGCGATCAACTTGCCATTGGAAAAGAAACTGGTCGCAGACTTGGAATGGGAACCAACATGTACCCTTCATCCTCCCTTCTTGGCCAATCCAATGATGCAGCCATTGCATCAATTCCAATTGATGAACTTATTGAGAAGGCTGATGGATTTGCTGGAGTCTTCCCTGAGCACAAGTACGAGATTGTGAAGAGGTTGCAGGATAGGAAGCACATATGTGGTATGACCGGAGATGGTGTAAACGATGCACCAGCATTGAAGAAGGCAGACATTGGTATTGCTGTTGCTGATGCAACTGATGCCGCAAGGAGTGCCTCAGACATTGTCTTGACTGAGCCGGGTTTGAGTGTGATTGTGAGTGCTGTGTTGACAAGTAGGGCCATCTTCCAGAGGATGAAGAACTACACAATCTATGCTGTTTCCATCACAATCCGTATTGTTCTTGGGTTCATGCTTGTTGCTCTAATTTGGAAGTTTGATTTCTCCCCTTTCATGGTTTTGATCATCGCCATTTTGAATGATGGAACCATCATGACCATCTCCAAGGACAGGGTGAAGCCATCTCCTGTTCCCGATTCATGGAAGCTCAAAGAAATCTTCGCAACAGGAGTTGTTCTTGGAACATATATGGCCATCATGACTGCAGTTTTCTTCCATTTTATTCACGACACCGATTTCTTCTCAGAAATCTTCGATGTCCACTCAATTGCAGACAGTGAGGAACAGCTTAACTCAGCTCTCTACCTCCAAGTGAGTATCATTAGTCAGGCACTTATCTTTGTGACCAGGTCAAGAAGCTGGTCATTCGTCGAGCGCCCTGGTTTGATGCTTCTTGGAGCCTTCATTGCTGCACAATTGGTGGCAACTGCCATTGCTGTGTATGCACACTGGGACTTTGCTAGAATCAATGGAATTGGGTGGAGATGGGCTGGAGTTATCTGGATCTACAGCATTATTACATACATTCCTCTTGACATTCTCAAGTTTCTCATCCGCATGGGACTCACAGGTAGTGCATGGGACAACATGCTCCAAAACAAGACTGCATTCACAACAAAGAAAGACTACGGTAAAGGAGAGAGGGAGGCTCAATGGGCCGTGGCTCAACGTACAATGCACGGCCTTGACACTCAAGACGCCCACAAGAACAACCACCACCATGAGCTCTCTTAA 2511 0.4628 MWNPLSWVMEAAAIMAIVLANGGGKPPDWQDFTGIMVLLIINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKWSEQEAEILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTRNPGQEVFSGSTCKQGEIEAIVIATGVHTFFGKAAHLVDSTNNVGHFQKVLTSIGNFCICSIAVGMVIEIIVMYPIQNRAYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFPTDMNKDSVVLYAARASRVENQDAIDASIVNMLSDPKEARAGITEVHFLPFNPVDKRTAITFIDGNGNWHRSSKGAPEQIIELCGLKGETLKRAHKTIDEYAERGLRSLAVGFQTVSEKTKESAGEPWVFLGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSNDAAIASIPIDELIEKADGFAGVFPEHKYEIVKRLQDRKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLVALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPVPDSWKLKEIFATGVVLGTYMAIMTAVFFHFIHDTDFFSEIFDVHSIADSEEQLNSALYLQVSIISQALIFVTRSRSWSFVERPGLMLLGAFIAAQLVATAIAVYAHWDFARINGIGWRWAGVIWIYSIITYIPLDILKFLIRMGLTGSAWDNMLQNKTAFTTKKDYGKGEREAQWAVAQRTMHGLDTQDAHKNNHHHELS* 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1897 836 Gene3D - 28 749 - -
Mtr2g1897 836 Gene3D - 275 422 IPR023299 GO:0000166
Mtr2g1897 836 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 497 609 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mtr2g1897 836 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 35 282 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mtr2g1897 836 Gene3D - 260 559 IPR023214 -
Mtr2g1897 836 SFLD p-type atpase 245 574 IPR044492 -
Mtr2g1897 836 Pfam haloacid dehalogenase-like hydrolase 259 536 - -
Mtr2g1897 836 Gene3D - 66 150 - -
Mtr2g1897 836 CDD P-type_ATPase_H 1 775 IPR006534 GO:0008553|GO:0016021|GO:0120029
Mtr2g1897 836 PANTHER PLASMA MEMBRANE ATPASE 1 836 - -
Mtr2g1897 836 PRINTS H+-transporting ATPase (proton pump) signature 379 397 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mtr2g1897 836 PRINTS H+-transporting ATPase (proton pump) signature 494 510 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mtr2g1897 836 PRINTS H+-transporting ATPase (proton pump) signature 522 538 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mtr2g1897 836 PRINTS H+-transporting ATPase (proton pump) signature 553 578 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mtr2g1897 836 PRINTS H+-transporting ATPase (proton pump) signature 694 715 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mtr2g1897 836 Pfam E1-E2 ATPase 65 242 - -
Mtr2g1897 836 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 1 740 IPR006534 GO:0008553|GO:0016021|GO:0120029
Mtr2g1897 836 SUPERFAMILY Calcium ATPase, transduction domain A 66 163 IPR008250 -
Mtr2g1897 836 PANTHER CALCIUM-TRANSPORTING ATPASE 1 836 - -
Mtr2g1897 836 SUPERFAMILY Calcium ATPase, transmembrane domain M 1 779 IPR023298 -
Mtr2g1897 836 SUPERFAMILY HAD-like 259 569 IPR036412 -
Mtr2g1897 836 SFLD Haloacid Dehalogenase 245 574 - -
Mtr2g1897 836 PRINTS P-type cation-transporting ATPase superfamily signature 113 127 - -
Mtr2g1897 836 PRINTS P-type cation-transporting ATPase superfamily signature 263 277 - -
Mtr2g1897 836 PRINTS P-type cation-transporting ATPase superfamily signature 417 428 - -
Mtr2g1897 836 PRINTS P-type cation-transporting ATPase superfamily signature 439 449 - -
Mtr2g1897 836 PRINTS P-type cation-transporting ATPase superfamily signature 522 541 - -
Mtr2g1897 836 PRINTS P-type cation-transporting ATPase superfamily signature 545 557 - -
Mtr2g1897 836 ProSitePatterns E1-E2 ATPases phosphorylation site. 265 271 IPR018303 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1897 Mtr-Chr2 23472861 23477553 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1897 1 836 Primary Pumps ATPases AT3G42640 86.244 0.0 1455
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1897 K01535 - gmx:100798717 1466.44