Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1892 ATGGCTGTGGTGGAGAATCAAAGCAGAGATGAAGATGGGGTCATTGACCGTTTTCCTGTTGGTATGCGTGTTCTTGCTGTTGATGACAACCCCACTTGTCTCAAAGTCTTGGCTAAACTGCTTTCTGAATGCAAATATCATGTTACTACAGCTACTAATGGATTTGATGGACTAAAAATGTTGAGGGAAAACAGAAAGAACTTTGACCTGGTTATCAGTGATGTGGCTATGCCCGACATGGATGGATTTAAGTTGCTTGAGTTGGTAGGACTTGAAATGGACTTACCTGTCATCATGTTGTCGGGATACAGTGATACAAGTATGGTATTCAAGGGTGTTACCCATGGTGCATGTGACTATCTGGTGAAACCTGTTCGACTTGAAGAGCTTAGAAACATATGGCAACATGTAGTCCGAAAGAAAAAAACTTATTCCAAGGATGTTAACAAGGCTTCCAATGAGGATAAGGTCCCTAATATCTCTGGGGGAAGCAATCAAAACATATTGGAGAACAGTGTTGATCAGAATAAAAGGCTCGGTAAAAGAAGGAAGGAGCAAGATGAGGAGGAGAAAGAAGAAGAAGATGAAGAGAGTGGAGATGGAGATGAGGACGAGGATGACCCGTCATCACAGAAGAAACCTCGTGTGGTTTGGTCTCCTGAGTTGCATAAGAAATTTGTTGGTGCTGTTAATCTACTTGGTGCAGACAGGGCTGTTCCGAAGAAAATACTTGAGCTGATGAATATTGAAGGGATTACCAGAGAAAATGTGGCAAGCCATTTGCAGAAATATAGACTCTATCTGAAAAAGGCAACTCCCCATGATACTAACATGGTTGCTGGACTGGGCGGTGGTAATGATTCTTACCTTCGGATGAGAGGAATAGATGGATATGCAGACTTTTGCACCTCAACCAGATCTGGAAGGATAGGAAGCACCACATTGCCGTCATATGCACCGAGCGGAGTTTTCGGTAGGCTGAATTCCCCAGCCGGCTTGAACATGAGAGGAATTAATTCTTCAATACTGATTCAGCCTGTTCAGTCTCACAACACCAACAGCTCCTGGATTCCTGCAAATCAAAGCTCAAGCTTATTACATGGTGTTCCAACCGAGCTTAACCAATCTAAGCTAAACAATAGTGCAGCTGGTATATCGCAGTTAAATCAAATAGATTCCACTGGATTTGCAGCTGCTTCAGACTTTCACGATAGTAGGGCTATTAACAGTTCTAATCAAGTCTCAAACCATCATCTCTTGTTGCAAGGAAATTCACAACAGACACACAATGCAGGGTCATTCAGAAATCAGTCTTCTGTTGGATCTGCTTCCTTGGGAAACAAAAACATTACTATTGGCGGTTCTTCTAATTTGTTGGATTATAATCGGTGTAGTGAAAACTGGCAAAGTCAAGCTCAGTTACCTAAATTTCCTGCTAGTTCTTTGCCGGTATGCAAGTCTTTCAATAATGACCAACTGCCTCTCACTAGCGTTACTGCTTATAACCAAAGCCCTCTAATCGCTAACAGTTCAGTTGACTTTTCGTCTGGAAACACAATCACTGTTGCTTTGGAGGAAGCTAGAAATGTGCCAAGATGCCAAGAAGATGGCTTAATTGGGAATTTTATACAGCCTTCAAGTTATGCTCCACGACAAAGCTGGGCAGAAAATAAACCGGATTACAGCCAAAACACGGGTCGCCCCTTCAATCCTGTGAACTCACAGGTTTGTTCCAGCAGGGCATTGACAAATTCCGCGTCTCACAATATTAACCAAAGTAAAACAGTCTGCAGCAATAGAGTTGATACATCCTTTGTTGATCAAGTATATGGCGCTTCCACGTCAGTTGCCCGGTACCCCGAAGCTGAGAAATTCTCGTCAGATGTACAAGTCAACTCGAATGATGCCTACAAGTTGGAGAAGATGAGGTCCCAAGTTGGATATGTTGAGGGTTTTGGAACCTTAGAAGACATAATGGGTGCAATAGTCAAAAGGGAGCAAATTGAGATGACATTGATGGATGGAGAAATGTGTTATGATTCATACCCTGTTGGATCATGTATTTGA 2067 0.4253 MAVVENQSRDEDGVIDRFPVGMRVLAVDDNPTCLKVLAKLLSECKYHVTTATNGFDGLKMLRENRKNFDLVISDVAMPDMDGFKLLELVGLEMDLPVIMLSGYSDTSMVFKGVTHGACDYLVKPVRLEELRNIWQHVVRKKKTYSKDVNKASNEDKVPNISGGSNQNILENSVDQNKRLGKRRKEQDEEEKEEEDEESGDGDEDEDDPSSQKKPRVVWSPELHKKFVGAVNLLGADRAVPKKILELMNIEGITRENVASHLQKYRLYLKKATPHDTNMVAGLGGGNDSYLRMRGIDGYADFCTSTRSGRIGSTTLPSYAPSGVFGRLNSPAGLNMRGINSSILIQPVQSHNTNSSWIPANQSSSLLHGVPTELNQSKLNNSAAGISQLNQIDSTGFAAASDFHDSRAINSSNQVSNHHLLLQGNSQQTHNAGSFRNQSSVGSASLGNKNITIGGSSNLLDYNRCSENWQSQAQLPKFPASSLPVCKSFNNDQLPLTSVTAYNQSPLIANSSVDFSSGNTITVALEEARNVPRCQEDGLIGNFIQPSSYAPRQSWAENKPDYSQNTGRPFNPVNSQVCSSRALTNSASHNINQSKTVCSNRVDTSFVDQVYGASTSVARYPEAEKFSSDVQVNSNDAYKLEKMRSQVGYVEGFGTLEDIMGAIVKREQIEMTLMDGEMCYDSYPVGSCI* 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1892 688 MobiDBLite consensus disorder prediction 149 217 - -
Mtr2g1892 688 MobiDBLite consensus disorder prediction 189 205 - -
Mtr2g1892 688 Gene3D - 212 271 - -
Mtr2g1892 688 PANTHER TWO-COMPONENT RESPONSE REGULATOR 5 669 - -
Mtr2g1892 688 CDD REC_typeB_ARR-like 24 138 - -
Mtr2g1892 688 MobiDBLite consensus disorder prediction 154 174 - -
Mtr2g1892 688 PANTHER TWO-COMPONENT RESPONSE REGULATOR 5 669 IPR045279 GO:0009736
Mtr2g1892 688 PIRSF RR_ARR_type-B 1 688 IPR017053 GO:0003677|GO:0003700|GO:0009736
Mtr2g1892 688 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 210 269 IPR017930 -
Mtr2g1892 688 SMART REC_2 22 134 IPR001789 GO:0000160
Mtr2g1892 688 Coils Coil 169 197 - -
Mtr2g1892 688 SUPERFAMILY CheY-like 21 146 IPR011006 -
Mtr2g1892 688 Pfam Myb-like DNA-binding domain 215 265 IPR001005 -
Mtr2g1892 688 Pfam Response regulator receiver domain 24 133 IPR001789 GO:0000160
Mtr2g1892 688 SUPERFAMILY Homeodomain-like 211 270 IPR009057 -
Mtr2g1892 688 ProSiteProfiles Response regulatory domain profile. 23 138 IPR001789 GO:0000160
Mtr2g1892 688 Gene3D - 22 211 - -
Mtr2g1892 688 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 213 266 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1892 Mtr-Chr2 23367993 23372548 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1892 14 428 Response Regulator Gene Family AT2G25180 46.370 6.12e-106 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Mtr2g1892 Response_reg 1.1e-23 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1892 K14491 - gmx:100776075 822.002