Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1880 ATGGCCGCTTCTGCTTCTCATTTCCTTCACCCTCTTAATCAAATACAATTCCCCAAATGCCCTCACCTTTTTACTAAATCCCACTTTCACCCTCGCCTTCTCCGCTCTCAAACCCAAAGGTTCAATATCCGTGCCACCTCTGCTGTTGTTGTGGACTCTCCGTTGGATTTAAGTACGAAGAAGGATCAGGGAACACAAGTTGACTTATTCGCATGCCCGATATGTTACGAACCATTGATAAGAAAAGGTCCCATTGGCCTGAACTTGCCAGCAATATACAGATCTGGTTTCAAGTGTAAGAGATGTCAAAAATCGTACACTAGCAAAGACGGATATCTGGATCTGACAGTGACTTCTGGGTTGAGAGATTATGTAGAAGTTCAACCAAATCGGACAGAACTTTTTAGGAGTCCCCTTGTTTCATTCCTATATGAAAGAGGTTGGCGTCAAAATTTCAGGCAAAGTGGCTTTCCTGGTCCTGATGAAGAGTTCAGAATGGCTCAAGAGTACTTTGAGCCTGCTAAAGGTGGTCGGATTGTCGATGTTAGCTGTGGAAGTGGTCTATTTTCCCGAAAATTTGCCAAATCTGGAACCTACTCTGGAGTAATTGCTCTAGATTTTTCTGAAAATATGCTCCGTCAATGCTACGATTTCATTAAGAAAGATGACACACTATCAACCACTAATCTTGCCCTTGTAAGAGCAGATGTTTCTAGGCTTCCCTTTGAATCAGGTTCAGTTGATGCGGTTCATGCTGGTGCTGCTTTGCATTGCTGGCCATCTCCCTCCAATGCTGTTGCCGAAATCACCCGTGTACTAAGAAGTGGTGGGGTATTTGTTGGAACCACTTTTCTTCGTTACACTTCATCAACTTCCTGGGTTGCACGCCTGTTCAGAGAGAGGTCTTCTCTAGGCTATGGCTACTTAACAGAAGAAGAAATCAAAGACCTTTGCACTTCATGTGGTCTTACAAATTATTCATGCAAAATTCAGAAGTCTTTTATTATGTTTACGGCTCAAAAGCCATAA 1029 0.4295 MAASASHFLHPLNQIQFPKCPHLFTKSHFHPRLLRSQTQRFNIRATSAVVVDSPLDLSTKKDQGTQVDLFACPICYEPLIRKGPIGLNLPAIYRSGFKCKRCQKSYTSKDGYLDLTVTSGLRDYVEVQPNRTELFRSPLVSFLYERGWRQNFRQSGFPGPDEEFRMAQEYFEPAKGGRIVDVSCGSGLFSRKFAKSGTYSGVIALDFSENMLRQCYDFIKKDDTLSTTNLALVRADVSRLPFESGSVDAVHAGAALHCWPSPSNAVAEITRVLRSGGVFVGTTFLRYTSSTSWVARLFRERSSLGYGYLTEEEIKDLCTSCGLTNYSCKIQKSFIMFTAQKP* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1880 342 PANTHER METHYLTRANSFERASE 39 341 - -
Mtr2g1880 342 CDD AdoMet_MTases 178 285 - -
Mtr2g1880 342 Pfam Methyltransferase domain 180 280 IPR013216 GO:0008168
Mtr2g1880 342 Gene3D Vaccinia Virus protein VP39 135 340 IPR029063 -
Mtr2g1880 342 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 139 341 IPR029063 -
Mtr2g1880 342 PANTHER - 39 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1880 Mtr-Chr2 23128322 23133889 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mtr2g1880 Methyltransf_11 1.1e-20 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1880 - - gmx:100812067 560.066