Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1872 ATGTCTATATATACGTATACATTCTATTTTTGTAGGAATGAAAGTGAGTATATCAACGCTATTGTTGACCGGATTTCAGACTTGTTGAATAAGACAGACTTGTTTATTTCGGATAACCCTGTGGGAATTCAATCTCGAGTGAAAGATGTGATTAACTGTCTAGACTTCGGATCAAACGGTGTTCAACTAGTAGGGATGTGGGGTATGGGGGGAGTTGGCAAAACAACCATTGCAAAAGCTGTTTACAATAAGATTGGCCGCGAGTTTGAAGGTAGGAGCTTCCTTGCAAATATTAGGGAAGTTTGGAAGCAAGATGGTAGACAAATAATGGGTTTACAAGAACAACTTTTATCTGATATCTGTAAAGAAAAAACCAAAATATCATACATTGACAAGGGAAAAAACACATTAAAGGATAAACTTTGCGGTAAAAGAGTACTTATTGTACTTGATGATGTGAGTACCCTAGACCAACTGAATACTTTTTGTGGAAGTCATGAATGGTTTGGCAAAGGGAGTGTAATAATCATCACAACAAGAGATTTGGTTTTACTCAGAGGGAGAGTTAACAGAATATACATAATGACAGTAATGAATGAAAGTGAGTCAATTGAGCTTTTTAGTTGGAATGCATTCAAGCAAGCGAGACCCAAAGTAGATTTTTCTGAAATTTCCATGAATGTGGTTAAGTATTCTGGAGGGTTGCCGCTAGCTCTGGAAGTCCTTGGGCGTAATTTGTTTGCTAGAGGGGTAACAGAATGGCAATGTGTATTGGAGAAACTCAAAAGAATTCCTAATGCTCAAGTGCAGAAGAAGTTAAGAATAAGTTATGATGATTTGGAAGATGCTGATGAGCAAGAAATATTCCTTGACATAGCTTGTTTCTTAATTGGAATGGACCGAAATGATGTTATACTCATATTAAATGGCTGTGGACTTCATGCAGAAATTGGAATAAGCGTCCTTGTTGAGAGAAGCCTTGTGAGTGTTGATGATAAGAACAGGCTTGGAATGCATGATTTGCTGCGAGATATGGGAAGAGGAATTGTTCGTGAGGAATCACCAAAGAGTCCTGAGAAGCGTAGCAGGTTGTTGTATCCGGAGGATGTGATTGACGTATTATCAAAACAAACTGGAGAAGAAAGTGTTATGGGACTGGCTTTGAAGTTGCCTAAAGCTAATGAATACTGTAAAGCTAATGAAAACTTTTTTAGTACTGACTCATTTGAAAAGATGAAAGGACTCAGATTGCTTCAACTTGCTGAAGTAAAACTTGATGGGGACTTTAGATATGTTTCAAGAGAGTTGAGATTGCTGTCATGGAATGGATTAAGTCACATACCTGAAAACTTCACCTCCGGAAAAAAATTAGTTTCCATCAAGTTAGAGAACGCCAATGTCCATCTTCTGTGGAACGAATCCATGTTCATGCGGTGTTTGAAGAAGTTGAAAGTTCTCAATCTTAGTCATTCTCACAATCTCACAGAAAGCCCTGACTTTCTTAAGCTGCCTAATCTTGAAAAGATAGTACTCAAAGATTGTCGGAACTTGACTATGGTTTCTTATAGCATCGTATTTCTCAACAGAGTTCTTCTAATAAATTTGCAAGACTGTGTAAGCCTTTGTAGCCTCCCAAGAAACATCTACAAGTTGAAATCTTTGAAAACTCTCATTCTTTCTGGCTGTGAAAAACTTGACAAGTTGGAAGAGGACTTGGAACAAATGGAATCTTTAACCACTCTGCTTGCAAATGAAACTGCAATAAAAAAAGTGCCATTTTCAATATTTAGGTCAAAAACTATTTGGTACATTTCTTTGTGTGGCTATGAAGGACTCTTAAGCGATGTAGTTCCATCTATGATTTGGTCTTGGATGTCACCAACAAGTGCACTTTCTTACCTATGCCAAAGAGTTGTAGCCATGTCATTTATTGTTTCTTTAGATATACATATACCACATGGTAGTAGTTCCCAGGAACTATCGTCTCGTTTAAAAAGCCTTCAACTTTCTAAAGATGGAAAAATCATTTTGGATTCTTTTTACGCCACACATTCTAAGGATTTGACATCGACTTCAGCTACTTCACCAGTATCAAAAGATTCCTTAAAGTATGATCTATTTGACATTGGAATGAATTGCCAGAACACCAATAATCTGACAGATATTTTACAGAATATGAATGTCAATGGTTGTTTGCTTCCTGGTGATAATTATCCAAATTGGTTAAACTTCAATTGCCAAGGTTCTTCTGTAACTTTTAAAGTCCCTGTAGTGAAAGGGCGTATGTTGAAGTCAATAATGATCTGCATTGTCTATTCTTCAACCCCGGATAACATAAGATCCGATGGCCCTACAGCCTTGTTGGTGAAAAATCATACAAAGGCCACCATTCAGTTCTACAAGAGAGGGGCACCGAAGTGTCGTCTAAGACTACTATCAAGTATAGAACCTGGTAATAAAGTGGAGGTTGCTGTTGTTTATGAGAACAATTTCATTGTAGAGCAGACATTCCTTTATCTCGTATATGATGAACCAGATTTGACTTCATATAGAAAGAAGAAAAATCGAGTGGAGTGA 2577 0.3729 MSIYTYTFYFCRNESEYINAIVDRISDLLNKTDLFISDNPVGIQSRVKDVINCLDFGSNGVQLVGMWGMGGVGKTTIAKAVYNKIGREFEGRSFLANIREVWKQDGRQIMGLQEQLLSDICKEKTKISYIDKGKNTLKDKLCGKRVLIVLDDVSTLDQLNTFCGSHEWFGKGSVIIITTRDLVLLRGRVNRIYIMTVMNESESIELFSWNAFKQARPKVDFSEISMNVVKYSGGLPLALEVLGRNLFARGVTEWQCVLEKLKRIPNAQVQKKLRISYDDLEDADEQEIFLDIACFLIGMDRNDVILILNGCGLHAEIGISVLVERSLVSVDDKNRLGMHDLLRDMGRGIVREESPKSPEKRSRLLYPEDVIDVLSKQTGEESVMGLALKLPKANEYCKANENFFSTDSFEKMKGLRLLQLAEVKLDGDFRYVSRELRLLSWNGLSHIPENFTSGKKLVSIKLENANVHLLWNESMFMRCLKKLKVLNLSHSHNLTESPDFLKLPNLEKIVLKDCRNLTMVSYSIVFLNRVLLINLQDCVSLCSLPRNIYKLKSLKTLILSGCEKLDKLEEDLEQMESLTTLLANETAIKKVPFSIFRSKTIWYISLCGYEGLLSDVVPSMIWSWMSPTSALSYLCQRVVAMSFIVSLDIHIPHGSSSQELSSRLKSLQLSKDGKIILDSFYATHSKDLTSTSATSPVSKDSLKYDLFDIGMNCQNTNNLTDILQNMNVNGCLLPGDNYPNWLNFNCQGSSVTFKVPVVKGRMLKSIMICIVYSSTPDNIRSDGPTALLVKNHTKATIQFYKRGAPKCRLRLLSSIEPGNKVEVAVVYENNFIVEQTFLYLVYDEPDLTSYRKKKNRVE* 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1872 858 Pfam NB-ARC domain 45 279 IPR002182 GO:0043531
Mtr2g1872 858 Gene3D - 197 281 IPR042197 -
Mtr2g1872 858 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 26 292 IPR027417 -
Mtr2g1872 858 Gene3D - 26 191 IPR027417 -
Mtr2g1872 858 SUPERFAMILY L domain-like 338 623 - -
Mtr2g1872 858 PRINTS Disease resistance protein signature 63 78 - -
Mtr2g1872 858 PRINTS Disease resistance protein signature 140 154 - -
Mtr2g1872 858 PRINTS Disease resistance protein signature 232 246 - -
Mtr2g1872 858 PRINTS Disease resistance protein signature 549 565 - -
Mtr2g1872 858 Gene3D Ribonuclease Inhibitor 393 689 IPR032675 -
Mtr2g1872 858 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 9 841 - -
Mtr2g1872 858 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 9 841 IPR044974 GO:0006952
Mtr2g1872 858 Coils Coil 558 585 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1872 Mtr-Chr2 22919436 22923358 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1872 41 597 WRKY Transcription Factor Family AT5G45050 33.045 2.36e-71 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1872 - - cam:101494533 982.63