Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1867 ATGGGGAAGGAAAAGAACTCCGAGTCTTCCTCATCCATGCCTAATCTTACCAGGGGAACAATGTCTGCGATGGATCTAAGAAGGCTGAAACGGTATAGTTGGGAACTATTCTCTGGTCCAGGACCAATATCAGAATCTGTAAGGATTCATGATGTGTTCTTAAGTTTCAGGGGAGTGGATACTCGTTCTACCTTCGTTTCACATCTATATACAGCTCTTCGAAATGCTGAAATTAAAGTTTTTCAAGACGATAGTGGGCTTCAAAGAGGAGATTACATTTCAACATCATTATTACGTGCAATTGAAGAGTCTCAAATTTCTTTAATTGTTTTCTCAAAAAACTATGCCAATTCAAAATGGTGTTTGGATGAATTGGATAAAATAATGATGTGTTATAGAACCATAGGACAAAAGGTTGTGCCTGTGTTTTACCATTTAGAACCATCTGAAGTGCGCCATCAGACAGGAGAGTTTGGAGTATCTTTTCAAAGTCTTTTGGATGAACTGCGTCTGCAGAGAATTATGTTTCCAAAAAGTTTTTTGATTAAACTGCATCCGACGAAATTGGTGCAAAATTGGAGAGAGGATCTTCGTCAGGCAGCTAGCATTGCAGGGTTTGAAATACTCAAGTCACGGAATGAAAGTGAGTATATCAAAGCTATTGTTGACCACATTTCAGACTTGTTGAATAAGACAGACTTGTTTATTTCGGATAACCCTGTGGGAATTCAATCTCGAGTGAAAGATGTGATTAACTGTCTAGACTTCGGATCAAACGGTGTTCAACTAGTAGGGATGTGGGGTATGGGGGGAATTGGCAAAACAACCATTGCAAAAGCTGTTTACAATAAGATTGGCCGCGAGTTTGAAGGTAGGAGCTTCCTTGCAAATATTAGGGAAGTTTGGAAGCAAGATGGTAGACAAATGGATTTACAAGAACAACTTTTATCTGATATCTGTAAAGAAATAACCAAAATATCATACATTGACAAGGGAAAAAACACATTAAAGGATAAACTTTGCGGTAAAAGAGTACTTATTGTACTTGATGATGTGAGTACCCTAGACCAACTGAATACTTTATGTGGAAGTCGTGAATGGTTTGGCAAAGGAAGTGTAATAATCATCACAACAAGAGATTTGGTTTTACTCAGAGGGAGAGTTGACAGAATATACACAATGACAGTAATGAATGAAAGTGAGTCAATTGAGCTTTTTAGTTGGAATGCATTCAAGCAAGCGAGACCCAAAGTAGATTTTTCTGAAATTTCCATGAATGTGGTTAAATATTCTGGAGGGTTGCCGCTAGCTCTGGAAGTCCTTGGGCGTTATTTGTTTGCTAGAGGGGTAACAGAATGGCAATGTGTATTGGAGAAACTCAAAAGAATTCCTAATGATCAAGTGCAGAAGAAGTTAAGAATAAGTTATGATGATTTGGAAGATACCGATGAGCAAGAAATATTCCTTGACATAGCTTGTTTCTTAATTGGAATGGACCGAAATGATGTTATACTCATATTAAATGACTGTGGACTTCATGCTGAAATTGGAATAAGCGTCCTTGTTGAGAGAAGCCTTGTGAGTGTTGATGATAAGAACAGGCTTGGAATGCATGATTTACTGCGAGATATGGGAAGAGGAATTGTTCGTGAGGAATCACCAAAGAGTCCTGAGAAGCGTAGCAGGTTGTTGTATCCGGAGGATGTGATTGACGTATTATCAAAACAAACTGGAGAAGAAAGTGTTATGGGACTGGCTTTGAAGTTGCCTAAAGCTAATAAATACTGTAAAGCTAATGAAAACTTTTTTAGCACCGACGCATTTGAAAAGATGAGAAGACTCAGATTGCTTCAACTTGCTGAAGTAAAACTTGATGGGGACTTTAGATATGTTTCAAGAGAGTTGAGATTGCTGTCATGGAATGGATTAAGTCACATACCTAAAAACTTCACCTCCGGAGAAAAATTAGTTTCCATCGAGTTAGAGAATGCCAATGTCCATCTTCTGTGGAACGAATCCAGGTTCATGCCGTGGATGAAGAAGTTGAAAGTTCTTAATCTTAGTCATTCTCACAATCTCACAGAAAGCCCCGACTTTTTTACGCTGCCTAATCTTGAAAAGATAGTACTCAAAGATTGTCGGAACTTGACTATGGTTTCTTATAGCATCGTATTTCTCAACAGAGTTCTTCTAATAAATTTGCAAGACTGTATAAGCCTTTGTAGCCTCCCAAGAAACATCTACAAGTTGAAATCTTTGAAAACTCTCATTCTTTCTGGCTGTAAAAAACTTAAAAAGTTGGAAGAGGACTTGGAACAAATGGAATCTTTAACCACTCTGCTTGCAAATGAAACTGCAATAAAAAAAGTGCCATTTTCAATATTTAGGTCAAAAACTATTTGGTACATTTCTTTGTGTGGCTATGAAGGACTCTTAAGCGATGTAGTTCCATCTATGATTTGGTCTTGGATGTCACCAACAAGTGCACTTTCTTACCTATGCCAAAGAGTTGTAGCCATGTCATTTATTGTTTCTTTAGATATACATATACCACATGGTAGTAGTTCCCAGGAACTATCGTCTCTTTTCAGAAGCCTTCAACTGTCTAAAGATGGAAAAATCATTTTGGATTCTTTTTACGCCACACTTTCTAAGGATTTGGCATCTACTTCAGCTACTTCATCAGTATCAAAAGATTCCTTAAAGTATGATCTATTTGACATTGGAATGAATTGCCAGAACACCAATAATCTCACAGACATTTTACAGAACACCAATAGATCCGATGGCCCTACAGCCTTGTTGGTGAAAAATCATACAAAGGCCACCATTCAGTTCTACAAGAGAGGGGCACCGAAGTGTCGTCTAAGACTACTATCAAGTATAGAACCTGGTAATAAAGTGGAGGTTGCTGTTGTTTATGAGAACAATTTCATTGTAGAGCAGACATTCCTTTATCTCGTATATGATGAACCAGATTTGACTTCATATAGAGAGAAGAAAAAACGAGTGGAGTGA 3018 0.3781 MGKEKNSESSSSMPNLTRGTMSAMDLRRLKRYSWELFSGPGPISESVRIHDVFLSFRGVDTRSTFVSHLYTALRNAEIKVFQDDSGLQRGDYISTSLLRAIEESQISLIVFSKNYANSKWCLDELDKIMMCYRTIGQKVVPVFYHLEPSEVRHQTGEFGVSFQSLLDELRLQRIMFPKSFLIKLHPTKLVQNWREDLRQAASIAGFEILKSRNESEYIKAIVDHISDLLNKTDLFISDNPVGIQSRVKDVINCLDFGSNGVQLVGMWGMGGIGKTTIAKAVYNKIGREFEGRSFLANIREVWKQDGRQMDLQEQLLSDICKEITKISYIDKGKNTLKDKLCGKRVLIVLDDVSTLDQLNTLCGSREWFGKGSVIIITTRDLVLLRGRVDRIYTMTVMNESESIELFSWNAFKQARPKVDFSEISMNVVKYSGGLPLALEVLGRYLFARGVTEWQCVLEKLKRIPNDQVQKKLRISYDDLEDTDEQEIFLDIACFLIGMDRNDVILILNDCGLHAEIGISVLVERSLVSVDDKNRLGMHDLLRDMGRGIVREESPKSPEKRSRLLYPEDVIDVLSKQTGEESVMGLALKLPKANKYCKANENFFSTDAFEKMRRLRLLQLAEVKLDGDFRYVSRELRLLSWNGLSHIPKNFTSGEKLVSIELENANVHLLWNESRFMPWMKKLKVLNLSHSHNLTESPDFFTLPNLEKIVLKDCRNLTMVSYSIVFLNRVLLINLQDCISLCSLPRNIYKLKSLKTLILSGCKKLKKLEEDLEQMESLTTLLANETAIKKVPFSIFRSKTIWYISLCGYEGLLSDVVPSMIWSWMSPTSALSYLCQRVVAMSFIVSLDIHIPHGSSSQELSSLFRSLQLSKDGKIILDSFYATLSKDLASTSATSSVSKDSLKYDLFDIGMNCQNTNNLTDILQNTNRSDGPTALLVKNHTKATIQFYKRGAPKCRLRLLSSIEPGNKVEVAVVYENNFIVEQTFLYLVYDEPDLTSYREKKKRVE* 1006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1867 1005 Gene3D - 396 480 IPR042197 -
Mtr2g1867 1005 SMART AAA_5 260 398 IPR003593 -
Mtr2g1867 1005 PRINTS Disease resistance protein signature 263 278 - -
Mtr2g1867 1005 PRINTS Disease resistance protein signature 339 353 - -
Mtr2g1867 1005 PRINTS Disease resistance protein signature 431 445 - -
Mtr2g1867 1005 PRINTS Disease resistance protein signature 748 764 - -
Mtr2g1867 1005 Coils Coil 764 784 - -
Mtr2g1867 1005 SUPERFAMILY L domain-like 537 821 - -
Mtr2g1867 1005 Pfam NB-ARC domain 245 477 IPR002182 GO:0043531
Mtr2g1867 1005 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 928 988 - -
Mtr2g1867 1005 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 56 926 - -
Mtr2g1867 1005 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 227 491 IPR027417 -
Mtr2g1867 1005 SUPERFAMILY Toll/Interleukin receptor TIR domain 43 165 IPR035897 -
Mtr2g1867 1005 Gene3D Ribonuclease Inhibitor 594 890 IPR032675 -
Mtr2g1867 1005 Gene3D - 231 389 IPR027417 -
Mtr2g1867 1005 Pfam TIR domain 50 232 IPR000157 GO:0007165
Mtr2g1867 1005 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 56 926 IPR044974 GO:0006952
Mtr2g1867 1005 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 928 988 IPR044974 GO:0006952
Mtr2g1867 1005 SMART till_3 49 203 IPR000157 GO:0007165
Mtr2g1867 1005 Gene3D - 47 230 IPR035897 -
Mtr2g1867 1005 ProSiteProfiles TIR domain profile. 48 229 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1867 Mtr-Chr2 22796648 22802529 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1867 25 794 WRKY Transcription Factor Family AT4G12020 29.024 3.68e-69 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1867 - - mtr:MTR_2g450830 1235.32