Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1866 ATGGAGACAGCGTTTGTTGCAGGAATCGGACCATTGTTAGCAGTACCAGAAGTGCCTGCTGCAGTACTAGGAGTGAAAAACGGTGGAAGTCCATACGAAAACCCAGTCGGCATAACGAAGCGAGCATCAGTAGATGCAGTTGGGATCACACTTGTAGTTATAGGGCTGAAATGGCATGTTTTGGAACTAGGCTCTAGTCCAGGACCAATATCAGAATCTGTAAGGATTCATGATGTGTTCTTAAGTTTCAGGGGAGTGGATACTCGTTCTACGTTCGTTTCACATCTATATACAGCTCTTCGAAATGCTGGAATTAAAGTTTTTCAAGACGATAGTGGGCTTCAAAGAGGAGATTACATTTCAACATCATTATTCCGTGCAATTGAAGAGTCTCAAATTTCTTTAATTGTTTTCTCAAAAAACTATGCCAATTCAAAATGGTGTTTGGATGAATTGGAAAAAATAATGAAGTGTTACAGAACCATAGGACAAAAGGTTGTGCCTGTGTTCTACCATTTAGAACCATCTGAAGTGCGCCATCAGACAGGAGAGTTTGGAATATCTTTTCATAGTCTTTTGTATGAACTGCTTCCGCAGACAAGTATGTTTCGAAGCTATAATATAAGATTTTTGACCACCAAAATTTGGAACAAGAAGAAATTTACGCAAGATTGGAGAGAGGCTCTTCGTCAGGCAGCTAGCATTGCAGGGTTTGAAATACTCAAGTCACGGAATGAAAGTGAGTATATCAAAGCTATTGTTGACCACATTTCAGACTTGTTGAATAAGACAGACTTGTTTATTTCGGATAACCCTGTGGGAATTCAATCTCGAGTGAAAGATGTGATTAACTGTCTAGACTTCGGATCAAACGGTGTTCAACTAGTAGGGATGTGGGGTATGGGGGGAATTGGCAAAACAACCATTGCAAAAGCTGTTTACAATAAGATTGGCCGCGAGTTTGAAGGTAGGAGCTTCCTTGCAAATATTAGGGAAGTTTGGAAGCAAGATGGTAGACAAATGGGTTTACAAGAACAACTTTTATTTGATATCTGTAAAGAAATAACCAAAATATCATACATTGACAAGGGAAAAAACACATTAAAGGATAAACTTTGCGGTAAAAGAGTACTTATTGTACTTGATGATGTGAGTACCCTAGACCAACTGAATACTTTATGTGCAAGTCGTGAATGGTTTGGCAAAGGGAGTGTAATAATCATCACAACAAGAGATTTGGTTTTACTCAGAGGGAGAGTTGACAGAATATACATAATGACAGTAATGAATGAAAGTGAGTCAATTGAGCTTTTTAGTTGGAATGCATTCAAGCAAGCGAGACCCAAAGTAGATTTTTCTGAAATTTCCATGAATGTGGTTAAGTATTCTGGAGGGTTGCCGCTAGCTCTGGAAGTCCTTGGGCGTTATTTGTTTGCTAGAGGGGTAACAGAATGGCAACGTGTATTGGAGAAACTCAAAAGAATTCCTAATGATCAAGTGCAGAAGAAGTTAAGAATAAGTTATGATGATTTGGAAGATACTGATGAGCAAGAAATATTCCTTGACATAGCTTCTTTCTTAATTGGAATGGACCGAAATGATGTTATACTCATATTAAATGACTGTGGACTTCATGCAGAAATTGGAATAAGCGTCCTTGTTGAGAGAAGCCTTGTGAGTGTTGATGATAAGAACAGGCTTGGAATGCATGATTTGCTGCGAGATATGGGAAGAGGAATTGTTCATGAGGAATCACCAAAGAGTCCTGAGAAGCGTAGCAGGTTGTTGTATCCGGAGGATGTGATTGACGTATTATCAAAACAAACTGGAAAAGAAAGTGTTATGGGACTGGCTTTGAAGTTGCCTAAAGCTAATAAATACTGTAAAGCAATGAAAACTTTTAGAGAACGCCAATGTCCATCTTCTGTGGAACGAATCCAGGGTATTACACTTCATGACGCACTTCATTTTAGTTTTTCACACTTCATGACTTATTTTCACTTTTTATATTTATGGCTGAAATTTAAATTAAAAAAAAAATACCGACGATTGAAGTTAAATCTCTAA 2067 0.3812 METAFVAGIGPLLAVPEVPAAVLGVKNGGSPYENPVGITKRASVDAVGITLVVIGLKWHVLELGSSPGPISESVRIHDVFLSFRGVDTRSTFVSHLYTALRNAGIKVFQDDSGLQRGDYISTSLFRAIEESQISLIVFSKNYANSKWCLDELEKIMKCYRTIGQKVVPVFYHLEPSEVRHQTGEFGISFHSLLYELLPQTSMFRSYNIRFLTTKIWNKKKFTQDWREALRQAASIAGFEILKSRNESEYIKAIVDHISDLLNKTDLFISDNPVGIQSRVKDVINCLDFGSNGVQLVGMWGMGGIGKTTIAKAVYNKIGREFEGRSFLANIREVWKQDGRQMGLQEQLLFDICKEITKISYIDKGKNTLKDKLCGKRVLIVLDDVSTLDQLNTLCASREWFGKGSVIIITTRDLVLLRGRVDRIYIMTVMNESESIELFSWNAFKQARPKVDFSEISMNVVKYSGGLPLALEVLGRYLFARGVTEWQRVLEKLKRIPNDQVQKKLRISYDDLEDTDEQEIFLDIASFLIGMDRNDVILILNDCGLHAEIGISVLVERSLVSVDDKNRLGMHDLLRDMGRGIVHEESPKSPEKRSRLLYPEDVIDVLSKQTGKESVMGLALKLPKANKYCKAMKTFRERQCPSSVERIQGITLHDALHFSFSHFMTYFHFLYLWLKFKLKKKYRRLKLNL* 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1866 688 SUPERFAMILY Toll/Interleukin receptor TIR domain 69 238 IPR035897 -
Mtr2g1866 688 Pfam NB-ARC domain 277 509 IPR002182 GO:0043531
Mtr2g1866 688 SMART till_3 76 235 IPR000157 GO:0007165
Mtr2g1866 688 Pfam TIR domain 77 192 IPR000157 GO:0007165
Mtr2g1866 688 Gene3D - 428 512 IPR042197 -
Mtr2g1866 688 SMART AAA_5 292 430 IPR003593 -
Mtr2g1866 688 Gene3D - 260 421 IPR027417 -
Mtr2g1866 688 SUPERFAMILY "Winged helix" DNA-binding domain 499 605 IPR036390 -
Mtr2g1866 688 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 259 523 IPR027417 -
Mtr2g1866 688 PRINTS Disease resistance protein signature 295 310 - -
Mtr2g1866 688 PRINTS Disease resistance protein signature 371 385 - -
Mtr2g1866 688 PRINTS Disease resistance protein signature 463 477 - -
Mtr2g1866 688 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 83 637 - -
Mtr2g1866 688 ProSiteProfiles TIR domain profile. 75 261 IPR000157 GO:0007165
Mtr2g1866 688 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 83 637 IPR044974 GO:0006952
Mtr2g1866 688 Gene3D - 75 259 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1866 Mtr-Chr2 22773830 22793232 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1866 273 661 WRKY Transcription Factor Family AT5G45050 34.694 2.28e-55 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1866 - - mtr:MTR_2g450830 1090.1