Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1849 ATGACGTCACGTTCGTCGCATATCAGCGGAGGAAGCAGCAACGGCGGACGAGCGAAGGCGGGAAAGTATGAGCTGGGTAGGACGTTAGGTGAAGGTAATTTCGCGAAGGTGAAGTTTGCGAGACACATTGAAACTGGTGATCATGTTGCTATCAAGATACTTGATAAAGAGAAAATTCTCAAGCATAAAATGATTCGTCAGATAAAACAAGAAATATCAACAATGAAACTGATTAGACACCCAAATGTCATACGCATGCATGAGGTAATAGCTAACAGGTCAAAGATATTCATTGTAATGGAACTCGTGACTGGTGGGGAGCTGTTTGATAAAATTGCTCGCAGTGGGAGGTTGAAAGAAGATGAAGCAAGAAAATATTTTCAGCAGCTTATATGTGCTGTGGATTACTGTCACAGTAGAGGTGTTTGCCACAGAGACCTAAAGCCTGAGAATTTGTTGCTGGATACTAATGGAACGCTCAAAGTATCGGATTTTGGATTGAGTGCATTGCCTCAACAAGTTCGGGAAGATGGACTACTTCACACAACATGTGGTACACCAAATTATGTTGCTCCAGAGGTGATCCAAAACAAAGGGTATGATGGTGCAATCGCAGATCTCTGGTCATGTGGTGTTATTCTTTTTGTTTTAATGGCTGGCTATTTGCCCTTTGAAGAAGACAATCTTGTAGCTTTGTATAAAAAGATTTTCAAGGCTGACTTCACCTGCCCTCCATGGTTCTCATCAAGTGCAAAGAAACTAATCAAAAGAATTCTCGATCCCAGTCCTATCACACGGATTAAAATTGCCGAGGTCATTGAAAATGAGTGGTTCAAGAAGGGATATAAACCTCCTGTGTTTGAACAGGCTGATGTTAGTCTTGATGATGTAAATTCTATTTTCAATGGTTATATGGATTCAGATAATATTGTTGTTGAGAGGCAAGAAGAGGGGCCTGTTGCACCTGTGACCATGAATGCATTTGAACTTATCTCTAAGTCTCAGGGCCTCAACCTTAGTAGTCTTTTTGAGAAGCAAATGGGACTTGTTAAAAGGGAAACGAGATTTACATCCAAATGTTCAGCGAATGAGATAATTTCAAAAATCGAGAAAACTGCAGGACCTCTGGGTTTTGATGTCAAGAAGAACAACTGCAAGTTAAGGATTTATGGGGAAAAGACTGGACGGAAAGGTCATCTATCTGTAGCTACTGAGATCTTGGAGGTAGCCCCTTCAATTTACATGGTTGAGATGCGAAAGTCTGAAGGAGATACTCTGGAATTTCACAAGTTCTACAAAAGTATAACTACTGGGCTGAAAGATATTGTTTGGAGAGCAGATCCTATTGCTGAAGAAAATGATGGTGCCAGTACCTCAAAATAA 1383 0.4071 MTSRSSHISGGSSNGGRAKAGKYELGRTLGEGNFAKVKFARHIETGDHVAIKILDKEKILKHKMIRQIKQEISTMKLIRHPNVIRMHEVIANRSKIFIVMELVTGGELFDKIARSGRLKEDEARKYFQQLICAVDYCHSRGVCHRDLKPENLLLDTNGTLKVSDFGLSALPQQVREDGLLHTTCGTPNYVAPEVIQNKGYDGAIADLWSCGVILFVLMAGYLPFEEDNLVALYKKIFKADFTCPPWFSSSAKKLIKRILDPSPITRIKIAEVIENEWFKKGYKPPVFEQADVSLDDVNSIFNGYMDSDNIVVERQEEGPVAPVTMNAFELISKSQGLNLSSLFEKQMGLVKRETRFTSKCSANEIISKIEKTAGPLGFDVKKNNCKLRIYGEKTGRKGHLSVATEILEVAPSIYMVEMRKSEGDTLEFHKFYKSITTGLKDIVWRADPIAEENDGASTSK* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1849 460 SMART serkin_6 23 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g1849 460 Gene3D Phosphorylase Kinase; domain 1 12 102 - -
Mtr2g1849 460 Gene3D Kinase associated domain 1, KA1 320 445 - -
Mtr2g1849 460 MobiDBLite consensus disorder prediction 1 20 - -
Mtr2g1849 460 Gene3D Transferase(Phosphotransferase) domain 1 103 285 - -
Mtr2g1849 460 PANTHER SERINE/THREONINE KINASE 17 450 - -
Mtr2g1849 460 Pfam NAF domain 322 382 IPR004041 GO:0007165
Mtr2g1849 460 Pfam Protein kinase domain 23 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g1849 460 ProSiteProfiles NAF domain profile. 320 344 IPR018451 GO:0007165
Mtr2g1849 460 CDD STKc_SnRK3 22 277 - -
Mtr2g1849 460 ProSitePatterns Serine/Threonine protein kinases active-site signature. 142 154 IPR008271 GO:0004672|GO:0006468
Mtr2g1849 460 SUPERFAMILY Protein kinase-like (PK-like) 21 293 IPR011009 -
Mtr2g1849 460 CDD CIPK_C 326 434 - -
Mtr2g1849 460 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 17 450 - -
Mtr2g1849 460 ProSiteProfiles Protein kinase domain profile. 23 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g1849 460 ProSitePatterns Protein kinases ATP-binding region signature. 29 52 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1849 Mtr-Chr2 21919592 21927210 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1849 12 453 CBL-interacting serine-threonine protein kinases AT1G01140 66.071 0.0 634
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Mtr2g1849 Pkinase 5.7e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1849 - - gmx:100788746 786.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4151 4 55466913 55469023 Mtr2g1849 2 21919592 21927210 PCT