Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1848 ATGCATCTTTCTCTACACACTCTTTTACCCTCCAACACCATGTTCCCAGCTGCTAGAACCATAGCTCTACACTCTTCATCTCTATGCTCAGTCTCATCTGATAAACCATCATCACCTCCTTCAACCAATTTAACTCCCAAACCCAAAAGTCTCCTTCAAAACCATCCACTTTACACACCAACTAATGAAAAACTCTCACTTCAATTCAAAGAAAAAATTCTCTGTCTTGAAGTTATGGGCATTGATTCAGGTAAAGCACTCTCTCAAAACCCTAACCTTCATACAGCTACCTTAGAATCCATTCATTCCATTATCACATTTCTTGTCTCTAAAGGTATCCAACATAAAGACCTTCCAAGAATCTTTGGCATGTGTCCTAAGATTCTCACATCAAGTATCAAAACTGATCTTAACCCAGTTTTTGATTTTCTCATACATGATCTTAAAGTGCCTGATCATAGCTTTAGAAAAGTTATCAAAAAGTGTCCAAGATTGCTTACTTCTAGTGTGGTGGATCAGCTTAAACCAGCTTTGTTTTATCTTAACAGATTAGGATTAAGAGATTTAGAAGCATTGGCTTATCAAGATTGTGTTCTTTTGGTTTCCAATGTTGAAAGGACAATTATTCCTAAACTTAAGCATTTGGAGAGTCTGGGATTTACTAAAGAAGAGGCTAGGTGTATGGTGTTGAGGTGTCCTGCATTGTTGACTTTTAGTATTGAGAATAATTTTCAGCCTAAGTTTGAGTATTTTTCTGTGGAAATGAAGGGGAAATTGGAGGAGTTGAAAGAGTTTCCTCAGTATTTCTCTTTTAGTTTGGAAAATAGGATAAAGGTTAGACACATGGAGGTTGTGGAAAGTGGGATCAATTTGCCTTTGTCATTGATGCTTAAAAGTACTGATGATGAATTTAGGGAGTTGATAAAGAAGGGGGCTGGATGA 942 0.3694 MHLSLHTLLPSNTMFPAARTIALHSSSLCSVSSDKPSSPPSTNLTPKPKSLLQNHPLYTPTNEKLSLQFKEKILCLEVMGIDSGKALSQNPNLHTATLESIHSIITFLVSKGIQHKDLPRIFGMCPKILTSSIKTDLNPVFDFLIHDLKVPDHSFRKVIKKCPRLLTSSVVDQLKPALFYLNRLGLRDLEALAYQDCVLLVSNVERTIIPKLKHLESLGFTKEEARCMVLRCPALLTFSIENNFQPKFEYFSVEMKGKLEELKEFPQYFSFSLENRIKVRHMEVVESGINLPLSLMLKSTDDEFRELIKKGAG* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1848 313 MobiDBLite consensus disorder prediction 32 55 - -
Mtr2g1848 313 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 29 310 - -
Mtr2g1848 313 Gene3D Transcription termination factor 3, mitochondrial 136 310 IPR038538 -
Mtr2g1848 313 PANTHER CGI-12 PROTEIN-RELATED 29 310 IPR003690 GO:0003690|GO:0006355
Mtr2g1848 313 SMART mt_12 259 290 IPR003690 GO:0003690|GO:0006355
Mtr2g1848 313 SMART mt_12 119 151 IPR003690 GO:0003690|GO:0006355
Mtr2g1848 313 SMART mt_12 226 258 IPR003690 GO:0003690|GO:0006355
Mtr2g1848 313 SMART mt_12 84 114 IPR003690 GO:0003690|GO:0006355
Mtr2g1848 313 SMART mt_12 156 187 IPR003690 GO:0003690|GO:0006355
Mtr2g1848 313 SMART mt_12 190 221 IPR003690 GO:0003690|GO:0006355
Mtr2g1848 313 Pfam mTERF 76 188 IPR003690 GO:0003690|GO:0006355
Mtr2g1848 313 Pfam mTERF 200 304 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1848 Mtr-Chr2 21917469 21918679 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mtr2g1848 mTERF 8.9e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1848 K15032 - gmx:100788221 455.677