Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1784 ATGAAACAAATGGAATTGGATGCCATAGAGGATAGTCCTCTTCGGCACAAACCTAAAAAGGACAATGCACTTGAGTCTCCTGAAAGTCTTAGAAGTAAAAAGATATCAGCTAGATGGGATCCATCTGAAGCATGTCGGCCTATAATTGATGAAGCACCTGTTTTTCATCCAACTATTGAAGAGTTTGAAGATACACTGAGTTACATAGCGAAGATACGCCCCCTAGCCGAACCTTATGGCATATGTAGGATTGTCCCTCCAGCTTGTTGGGTTCCACCTTGCCTTCTTAAGGAGAAAGATATTTGGGAAAACGCTGAATTTTCCACCCGTATCCAGCAAATTGATTTACTTCAAAATAGAGAACCTATGAAGAAAAAAAGTCGGGGAAGAAAGCGAAAACGTAGAAGGAACTCCAAATCAGGAACATGTAGGAGAGCTTCCAAATCAGCTTCTGAAGCTAATAATGCATCTGAAGCTGATGAGAAATACGGATTTCAAGCAGGGTCCGACTTCACGTTTAAAGACTTTCAGCAATATGCTAGCCACTTTAAGGAATGCTACTTTGGGTTGAAAGATGCAAATGAAGATGGAAAGGTCAATGATAGTAACCACCAAAACCGAAGGGAGCCCTCCGAGGAGGAAATTGAAGGTGAATACTGGCGGATAGTTGAGCAGCCAACGGATGAAGTTGAGGTGTACTATGGAGCGGACTTGGAAACTGGAGTATTTGGAAGTGGTTTTTCTAAGGCATCATCCATACCTAAGGGTTATCCGGATCAGTATGCAATTTCTGGTTGGAATCTAAATAACTTCCCGCGACTACCGGGTTCTGTACTAAGTTTTGAAGGAAGTGACATCTCAGGAGTACTAGTTCCATGGCTGTATGTTGGCATGTGCTTTTCATCATTTTGTTGGCATGTTGAGGATCATCACCTCTATTCGCTTAATTATCTACACTTTGGTGACTCAAAGATATGGTATGGAGTACCTGGAAGCCATGCTTCTGCTTTAGAAAATGCAATGAAGAAGCACTTGCCTGATTTGTTCGAGGAAGTACCAAATCTACTCAATGATCTGGTTACTCAGTTATCTCCATCAATTCTTAAAGATGAGGGAGTTCCCGTATATCGCACTGTTCAGAACTCTGGGGAATTTGTCATTACTTTTCCGAGGGGGTACCACTCTGGGTTCAATTGTGGGTTCAACTGTGCAGAAGCAGTGAATGTAGCTCCTGTCGATTGGTTAACGCATGGCCTAAATGCCGTTGAACTTTACAGTTTACAACGCCGTAAGACATCATTGTCACATGACAAGCTTTTATTTGGATCATCGCTGGAAGCTATACGAGCCCTTGCAGAGCTAACTCTTCATGGAAAGGAAAGTTCAAAAAATTTGAAATGGAGAAGCTACTGTGGGAAAGATGGTGTTCTTACTATGGCATTTAAGGCAAGGATAAAGATGGAAGAAGAGAGGCTAAACTGTCTTCCAACTCATTTTAAGTCACTGAAGATGGGCAACGACTTTGACTTGCATACAGAAAGAGAATGCTTTTCTTGCTTCTATGACTTGTATCTATCTGCTGTAGGTTGTGAGTGCTCTCCTGATAAATATTCTTGCCTTACGCATGCTAGTTCGTTCTGCATGTGCGAAATGGACCAAAGATTTGTTCTGCTTCGGTATAATATGAATGAGCTAAACAAATTGCTTGAAGCACTAGAAGGAGATTCACTTGCTCTTAAGTTATGGGAAAGTAAAAACTTCGGAATGGTTTCTGCCGAGGCCAATGAGGTTTGCATGAATAAACCAGAGGTGGATGGAGACAATGGTCATGAAGAAACTGGCTGTGCGGGAACCAGGGATAGGTCAAATAGTCACGCAACATCAGAGCCAATGCAGTGCGAATCTCACCTTGTAACCCTTAGTGCGCCGAATGAAAGTATAGATAGTGACAATGACAATATGATCGTCGTAGACAAAGATAAGGTCGATATTGCAGATAGCCATAACAAGGGTGATTCAGTAGAGGAAAAAGCATGTTGTTCAAAGATAAAAAAGGAACAAGACAACATGGAAATTGTGAAGACAGAAGTTTCATCATGCTCTAGGAATGTTCACAATCCTTGTACATCTGACAGTGGAAAATATGAGGGGCAACAGCAAATGGATTCAGATTCAAGAAAGAAACCCAAAATTGTAGTTGAAAAAGTCATTGACACCACGAGCGCGAGTATATCTCTGACACAGGAAAGCTTTCTAATGCAAATTTTGAGTACTTCTGTCAAGCCTATAAGTTTGGGATCTGTTGTTCATGGAAAGCTATGGTGCAATAAGCATGCAATATATCCAAAAGGATTCAAGAGCCGAGTTAATTTCTTTAGCATCATCGATCCAACAAGAATCTGTAGCTATGTTTCTGAAGTAATCAATGCTGGACTTCTAGGACCTCTTTTCAAGGTTACAATGGAGGAATGTCCAAGTGTCACTTTCACGGAAACCTCGGCAGATAAGTGTTGGGAATCAGTTCTTAAGAGACTACATGACAAAATCACGGAGCAAAGGAGTCTAGGTGAACTTGAACTTCCTTCCTTAGAGCTTCTGAAAAGCATCAACGGTTTTAGAATGTTCGGCTTCCCTTTACCGTCCATTGTTCAGGCCATTGAAGCTCAAGATCCCGGTCATCAGTGTGCAGAGTATTGGAATCACAAAGGTTTCCCTACATCTCCAGGAAGTGTCATCGATAACTGTAAAGTCCTATGTTGTTCAAGTAGCCCTACCAAAGTTTTTGGTATTAATTTGACTGATCAGGCGAAAGACAATATAGGAGGAAGTTCTTCTTCTCTTGAAGAGATGAAATCAATACTACAAAAGGCAAGTCCCGAAGAGTTAAGCTCATTGCGCAAGTTTCTCATCTCTGACGCACAATGTTCTGAGTGGAGAATTACATTAACATCATTGATCGATGAGATTCAGAAAGCTTTGTAG 2982 0.4131 MKQMELDAIEDSPLRHKPKKDNALESPESLRSKKISARWDPSEACRPIIDEAPVFHPTIEEFEDTLSYIAKIRPLAEPYGICRIVPPACWVPPCLLKEKDIWENAEFSTRIQQIDLLQNREPMKKKSRGRKRKRRRNSKSGTCRRASKSASEANNASEADEKYGFQAGSDFTFKDFQQYASHFKECYFGLKDANEDGKVNDSNHQNRREPSEEEIEGEYWRIVEQPTDEVEVYYGADLETGVFGSGFSKASSIPKGYPDQYAISGWNLNNFPRLPGSVLSFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHFGDSKIWYGVPGSHASALENAMKKHLPDLFEEVPNLLNDLVTQLSPSILKDEGVPVYRTVQNSGEFVITFPRGYHSGFNCGFNCAEAVNVAPVDWLTHGLNAVELYSLQRRKTSLSHDKLLFGSSLEAIRALAELTLHGKESSKNLKWRSYCGKDGVLTMAFKARIKMEEERLNCLPTHFKSLKMGNDFDLHTERECFSCFYDLYLSAVGCECSPDKYSCLTHASSFCMCEMDQRFVLLRYNMNELNKLLEALEGDSLALKLWESKNFGMVSAEANEVCMNKPEVDGDNGHEETGCAGTRDRSNSHATSEPMQCESHLVTLSAPNESIDSDNDNMIVVDKDKVDIADSHNKGDSVEEKACCSKIKKEQDNMEIVKTEVSSCSRNVHNPCTSDSGKYEGQQQMDSDSRKKPKIVVEKVIDTTSASISLTQESFLMQILSTSVKPISLGSVVHGKLWCNKHAIYPKGFKSRVNFFSIIDPTRICSYVSEVINAGLLGPLFKVTMEECPSVTFTETSADKCWESVLKRLHDKITEQRSLGELELPSLELLKSINGFRMFGFPLPSIVQAIEAQDPGHQCAEYWNHKGFPTSPGSVIDNCKVLCCSSSPTKVFGINLTDQAKDNIGGSSSSLEEMKSILQKASPEELSSLRKFLISDAQCSEWRITLTSLIDEIQKAL* 994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1784 993 MobiDBLite consensus disorder prediction 708 727 - -
Mtr2g1784 993 MobiDBLite consensus disorder prediction 117 158 - -
Mtr2g1784 993 Pfam C5HC2 zinc finger 516 568 IPR004198 -
Mtr2g1784 993 Pfam jmjN domain 53 86 IPR003349 -
Mtr2g1784 993 Gene3D - 754 896 - -
Mtr2g1784 993 MobiDBLite consensus disorder prediction 608 629 - -
Mtr2g1784 993 Pfam F/Y rich C-terminus 814 900 IPR003889 GO:0005634
Mtr2g1784 993 PANTHER LYSINE-SPECIFIC DEMETHYLASE 7 675 - -
Mtr2g1784 993 PANTHER LYSINE-SPECIFIC DEMETHYLASE 684 992 - -
Mtr2g1784 993 SMART fyrc_3 816 910 IPR003889 GO:0005634
Mtr2g1784 993 ProSiteProfiles FYR domain FYRC motif profile. 812 902 IPR003889 GO:0005634
Mtr2g1784 993 SMART fyrn_3 766 810 IPR003888 GO:0005634
Mtr2g1784 993 Pfam F/Y-rich N-terminus 763 807 IPR003888 GO:0005634
Mtr2g1784 993 Pfam JmjC domain, hydroxylase 293 409 IPR003347 -
Mtr2g1784 993 Gene3D Cupin 37 410 - -
Mtr2g1784 993 ProSiteProfiles FYR domain FYRN motif profile. 752 810 IPR003888 GO:0005634
Mtr2g1784 993 ProSiteProfiles JmjN domain profile. 52 93 IPR003349 -
Mtr2g1784 993 PANTHER DEMETHYLASE JMJ14-LIKE PROTEIN, PUTATIVE-RELATED 684 992 - -
Mtr2g1784 993 PANTHER DEMETHYLASE JMJ14-LIKE PROTEIN, PUTATIVE-RELATED 7 675 - -
Mtr2g1784 993 SMART cupin_9 260 426 IPR003347 -
Mtr2g1784 993 MobiDBLite consensus disorder prediction 197 216 - -
Mtr2g1784 993 MobiDBLite consensus disorder prediction 124 142 - -
Mtr2g1784 993 SMART JmjN_1 51 92 IPR003349 -
Mtr2g1784 993 MobiDBLite consensus disorder prediction 1 34 - -
Mtr2g1784 993 ProSiteProfiles JmjC domain profile. 260 426 IPR003347 -
Mtr2g1784 993 SUPERFAMILY Clavaminate synthase-like 171 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1784 Mtr-Chr2 20695518 20701742 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1784 60 990 JUMONJI Transcription Factor Family AT4G20400 47.684 0.0 810
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Mtr2g1784 JmjC 4.5e-45 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1784 - - gmx:100801775 1392.87