Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1742 ATGGAAGAAAAAATTCAAACAATGAAATTGCTAGAACTTGATGAAAGGCCACCATATGATGATAACAATAAAGATCTACAAAACAAGATCGATGAACCCTCTTCCTTCCATAAGAATACTCCAGGATCTACTCTTTTATTAAGTTTAAGCCTTAATAACACAACACAACCTCCCCATCAAATTCAAGGAGAGCCCCAAATCCAAATTGGCAATATACGAGTGAAGCTTGATGAAGCAAAGAAGGAGAATGAAAATTTAAGAGGTATGCTAAATCTGGTCAACGATCGATGCAATGTTCTTCAGAATCGTTTACTTTTGGCTATGCATATGCATCAATCATCTTCATTGTCTCAAAATAATCACAACTTGCTGCTGAAGGAAAATACACAAGATGCGGGGAAATCAGTGTTACCTACTCGGCAGTTCTTTGATGAGCCTTCACCTTCAAATTGTAGCAAAAATAATGGATTTGCCATAGTGGAAAACAATGAAAACAACATGGGAAGAAATCTTGCATGTGAATACATTAATGAAGGTGAAATAAATAGCAAAATAGAGGACCAATCATCTGAGGTTGGATGCAGGAGAGCTAGAGTGTCCATTAGGGCACGATCAGATTTTGCATTTATGGTTGATGGGTGTCAATGGAGAAAATATGGACAAAAGACGGCCAAGGGAAACCCTTGTCCACGAGCCTACTATCGTTGCAGTATGGGAACTTCATGCCCAGTTCGAAAGCAGGTTCAAAGGTGTTTTAAGGATGAGAGTGTGTTCATCACAACCTATGAAGGAAACCATAATCATCAACTTCCACCAGCAGCAAAACCAATAGCAAACCTAACATCATCAGCACTCAACACATTCCTTCCTACCTCATCAACAACTTTACAACAATATGGCAACAATCTAACAAACACATTCCTCTTCTCTTCACCATTATCTCCACCAAACTCAAATGCTATAGCTACTTTCTCTCCATCTCCAACATGCCCTACAATTACACTTGATTTTACACTCCCTCCAAGTAACTATTTACAATTCAAAAATCATAAACAATCATCATTGCTCCCTTTTCCATTCCAAGGTCATTACAATCAATCATTTGAGGTGTTTCCAAATATGATAAATAATGAGAGAAAACTTGCTTTGGTTGATGTTGTGAGTGAAGCTCTAGAGAAAGATCCTTCTCTAAAGGAAGCATTGTTTTCAGCCATGTCTTCATTCACAAATGGAGATTCTTCAAATATTATTAATAAGCAAAGCCAATTACCTAGTAAGAGTAGTGGTTAG 1290 0.3752 MEEKIQTMKLLELDERPPYDDNNKDLQNKIDEPSSFHKNTPGSTLLLSLSLNNTTQPPHQIQGEPQIQIGNIRVKLDEAKKENENLRGMLNLVNDRCNVLQNRLLLAMHMHQSSSLSQNNHNLLLKENTQDAGKSVLPTRQFFDEPSPSNCSKNNGFAIVENNENNMGRNLACEYINEGEINSKIEDQSSEVGCRRARVSIRARSDFAFMVDGCQWRKYGQKTAKGNPCPRAYYRCSMGTSCPVRKQVQRCFKDESVFITTYEGNHNHQLPPAAKPIANLTSSALNTFLPTSSTTLQQYGNNLTNTFLFSSPLSPPNSNAIATFSPSPTCPTITLDFTLPPSNYLQFKNHKQSSLLPFPFQGHYNQSFEVFPNMINNERKLALVDVVSEALEKDPSLKEALFSAMSSFTNGDSSNIINKQSQLPSKSSG* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1742 429 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 1 425 IPR044810 GO:0003700
Mtr2g1742 429 SUPERFAMILY WRKY DNA-binding domain 204 271 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr2g1742 429 SMART WRKY_cls 210 270 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr2g1742 429 Gene3D WRKY domain 195 272 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr2g1742 429 MobiDBLite consensus disorder prediction 15 39 - -
Mtr2g1742 429 ProSiteProfiles WRKY domain profile. 205 271 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr2g1742 429 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 425 - -
Mtr2g1742 429 Pfam WRKY DNA -binding domain 212 269 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr2g1742 429 Coils Coil 69 96 - -
Mtr2g1742 429 MobiDBLite consensus disorder prediction 15 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1742 Mtr-Chr2 19932652 19936705 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1742 70 338 WRKY Transcription Factor Family AT4G04450 37.855 4.24e-54 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mtr2g1742 WRKY 9.6e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1742 - - cam:101498660 574.318