Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1718 ATGGATGGTGTTACTGTTAAGTTTGAGCCAGAGCAGTTTACTGTTCTAGAATCTTCTCCTATTGCTGTTGATGGTGCTAGTTCAAACATGGTTGAAGGGTCAATGATGAATTCCTCAGCAAACAAGTCAATGCCAGCATCTGGAATGAATCCAGTGATTGCTAATACAACTCAGCTTACCATCTTCTATAATGGGAGTATTTGTATCTATGATGGAATTCCCGCAGAAAAGGTGCAAGAAATAATGCGCATTGCTGCTGCTGCTGCCAAGTCTAGTGAAACGAAGAAGATAGTGAAACAATCTCCCGCCCCTTCACCTGTTCCGACAAGGCCTTCTTCGCCACATGGAACTGCTGATAATATTGCTTCATCACAGGCACTTCCCTTTCCGGCAAAGAGTTCTATCTGCAGGATGCAAGAATTTCCAATAGCACGCAGACATTCACTTCAAATGTTTCTTCAGAAGCGGCGAGACAGGTTGGGTAGTAAAGCTCCTTATCCTTCCTCGCCAAAAACAAAGGTAGCTGACAACATGGAGAACAACTTCGGTGCTGATAATTCGCCAGATTCGGTTTCAATGAAGGAACCAAAGGAGGAATTTCAGCCAACTATATCTGCATCTTGA 624 0.4359 MDGVTVKFEPEQFTVLESSPIAVDGASSNMVEGSMMNSSANKSMPASGMNPVIANTTQLTIFYNGSICIYDGIPAEKVQEIMRIAAAAAKSSETKKIVKQSPAPSPVPTRPSSPHGTADNIASSQALPFPAKSSICRMQEFPIARRHSLQMFLQKRRDRLGSKAPYPSSPKTKVADNMENNFGADNSPDSVSMKEPKEEFQPTISAS* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1718 207 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 24 184 IPR040390 -
Mtr2g1718 207 PANTHER DIVERGENT CCT MOTIF PROTEIN 24 184 - -
Mtr2g1718 207 Pfam tify domain 55 86 IPR010399 -
Mtr2g1718 207 MobiDBLite consensus disorder prediction 92 124 - -
Mtr2g1718 207 MobiDBLite consensus disorder prediction 156 207 - -
Mtr2g1718 207 ProSiteProfiles Tify domain profile. 52 87 IPR010399 -
Mtr2g1718 207 Pfam Jas motif 142 166 IPR018467 -
Mtr2g1718 207 MobiDBLite consensus disorder prediction 173 188 - -
Mtr2g1718 207 SMART tify_2 52 87 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1718 Mtr-Chr2 19717671 19720662 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1718 58 169 Tify Gene Family AT5G20900 55.263 1.27e-31 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Mtr2g1718 tify 4.3e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1718 K13464 - gmx:100306045 249.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4552 4 59554612 59557348 Mtr2g1718 2 19717671 19720662 PCT