Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1716 ATGGCTCTTTCTTCAACAAAAGAGTTAGTACTATCTCGAACAAAACCAATACCCACTCTCATAACATGCACATTCATTTTAACATTATTGTTGTCTACTCCAGCACTATGTGCTAGTGCTCCCACTAAAGCAACATCTGAATTTGAGTTTCTTAAGGTTGCTCCATCTGAATTTGTTGGGACAGTGCAAGATGTTGTTGGCATTTTGCAAGAAGTAATGTCCATTCTTTCTCAATTTGGTGGTTCTGGATTTGGAGATTCACGTCTCTCTAATGCTGTTTCTGATTGCATTGATATGCTTGATCTTTCCTCTGATGCACTTACTTGGTCTGCCTCTGCTGCTCAGAACCCCAAAGGTAAGCATAATAGTACTGGAAATGTGAACTCTGATGTGAGAACATGGTTAAGTTCTGCACTTGCAAATCCAGAGACATGCATGGATGGATTTGAAGGTACAAGTGGCATTGAGAGCCAATTAGTGTCTACTGGCTTAAGCCAAATGATGTCAATGTTGGCAGAGCTTCTCACACAAGTAGACCCTAATTTAGATAGCTTTACACAAAAAGAACAAAAAGGTCGATTTCCTTCTTGGGTTAAAAGAGATGATAGAAAACTCTTGCAAGCAAATGGGGTGAACGTCGATGTTGTCGTTGCTACCGATGGAAGCGGGAATTTTACGAAGGTGATGGATGCGGTGCATGCAGCTCCTGATTATAGCATGAAACGATATGTGATATACGTAAAGAGAGGTGTTTATATTGAAAATGTTGAAATCAAGAAGAAGAAATGGAATCTCATGATGGTCGGAGATGGTATGAATGCCACAATTATCACTGGTAATCGGAGCTTCATCGACGGTTGGACCACGTTTAGGTCAGCAACCTTTGCTGTTAGTGGTAGAGGATTCATAGCAAGAGACATCTCTTTTCAGAACACTGCAGGTCCTGAGAAGCACCAAGCAGTGGCACTAAGATCCGACTCTGACCTCTCTGTATTCTATCGATGTGGGATTTTTGGTTACCAAGACAGCCTCTACACGCATACAATGCGCCAATTCTTCCGAGAATGCAAAATAAGTGGCACGGTGGATTTTATCTTTGGCGATGCCACGACTCTTTTTCAAAACTGTCAAATACTAGTAAAAAAAGGGTTACCAAATCAAAAGAACACTATCACAGCTCACGGACGAAAAGACCCTAACGAACCAACTGGTTTCTCAATCCAATTCTGCAACATTACCGCCGATACAGACCTTCTTCCTTCGGTTAATTCCACTTATACATATCTTGGAAGACCGTGGAAAGAATATTCAAGAACAATTTTCATGCAATCTCATATAAGTGATGTGTTGAGGCCAGAAGGGTGGTTAGAATGGAATGGAGATTTTGCATTGGATACATTGTATTATGCTGAGTACATGAATTATGGGTCTGGTGCTGGATTAAATAAACGAGTTAAATGGCCAGGGTATCACATTATGAATGATTCTAGTCAAGCTAGTAATTTTACAGTGACACAATTTATTGAGGGGAATCTATGGTTGCCCACAACAGGTGTAGCATTCACTGCTGGATTAGGAGTTTAA 1584 0.4066 MALSSTKELVLSRTKPIPTLITCTFILTLLLSTPALCASAPTKATSEFEFLKVAPSEFVGTVQDVVGILQEVMSILSQFGGSGFGDSRLSNAVSDCIDMLDLSSDALTWSASAAQNPKGKHNSTGNVNSDVRTWLSSALANPETCMDGFEGTSGIESQLVSTGLSQMMSMLAELLTQVDPNLDSFTQKEQKGRFPSWVKRDDRKLLQANGVNVDVVVATDGSGNFTKVMDAVHAAPDYSMKRYVIYVKRGVYIENVEIKKKKWNLMMVGDGMNATIITGNRSFIDGWTTFRSATFAVSGRGFIARDISFQNTAGPEKHQAVALRSDSDLSVFYRCGIFGYQDSLYTHTMRQFFRECKISGTVDFIFGDATTLFQNCQILVKKGLPNQKNTITAHGRKDPNEPTGFSIQFCNITADTDLLPSVNSTYTYLGRPWKEYSRTIFMQSHISDVLRPEGWLEWNGDFALDTLYYAEYMNYGSGAGLNKRVKWPGYHIMNDSSQASNFTVTQFIEGNLWLPTTGVAFTAGLGV* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1716 527 ProSitePatterns Pectinesterase signature 2. 358 367 IPR033131 -
Mtr2g1716 527 CDD PMEI-like_4 22 178 - -
Mtr2g1716 527 Gene3D - 212 527 IPR012334 -
Mtr2g1716 527 Pfam Pectinesterase 214 511 IPR000070 GO:0030599|GO:0042545
Mtr2g1716 527 Pfam Plant invertase/pectin methylesterase inhibitor 50 169 IPR006501 GO:0004857
Mtr2g1716 527 SMART PMEI_2 26 177 IPR006501 GO:0004857
Mtr2g1716 527 Gene3D Invertase/pectin methylesterase inhibitor family protein 33 178 IPR035513 -
Mtr2g1716 527 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 83 161 IPR035513 -
Mtr2g1716 527 SUPERFAMILY Pectin lyase-like 211 524 IPR011050 -
Mtr2g1716 527 PANTHER PECTINESTERASE 51 525 - -
Mtr2g1716 527 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 44-RELATED 51 525 - -
Mtr2g1716 527 TIGRFAM PME_inhib: pectinesterase inhibitor domain 84 171 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1716 Mtr-Chr2 19696898 19702442 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1716 26 525 Carbohydrate Esterase AT3G43270 62.791 0.0 684
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1716 K01051 - gmx:100777500 813.913
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4562 4 59646828 59650040 Mtr2g1716 2 19696898 19702442 PCT