Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1714 ATGGCTTCCTCATCTCACAAACTCTTCATCCTTCTCTTTACAATCCTCTTCTCACTCACATTACCTCTCAACACCAACACTTCCATAACCACATCACTAAATCCCAACAAACTCACTTCCTTAAAATCTTTATGCAAAACAACACCATACCCTAAACTTTGTTTCAACTCATTAAAACTTTCCATATCCATAAACATAAACCCAAACATCATAACCTACCTTCTTCATTCACTTCAACTAGCAATATCCGAAACCACAAAGCTCTCGAATCTTTTCCACGACGTTGGAACATCGAATATCGTAGAGAAACAACGAGGATCAATTCAAGACTGCAAGGAACTTCATCAATCAACCTTAACTTCATTGAAAAGATCATTATCCGGAATCCGTTCCTCGAACAAAAGAAACATAGCTGATGCTAGAATCTACCTCAGTGCAGCCCTAACCAACAAAAACACATGTTTAGATGGTCTTGATTCTGCTTCTGGTACATATAAACCAATTCTTGTGGATTCTATTATCAACACTTACAAACATGTAAGTAACTCTCTTTCTATGCTTTCTAATCATGCACCTGAGCCTTCAAATCAAAAGGGTCACAACAAAAATTTGGTTTCTCCAAAATGGTTATCAAAAAGGTTAGATTTTGATGAATATGATCCAAATGAAATGCTAGTTGTATCTGCAGATGGAAGTGGAAACTTTAGCACTATTAATGATGCTATAAACTTTGCTCCAAATAATAGTTTGGTTAGGATAGTTATTTATGTTAAAGAAGGGTATTATGATGAAAATGTTGAAATACCAAGTTATAAAACTAACATTGTGATGCTTGGTGATGGAAGTGATTCTACTGTCATCACTGGTAACAGAAGTGTTGTTGATGGATGGACCACTTTCAGATCTGCAACTTTAGCTGTATCTGGAGATGGATTTCTTGCAAGAGACATAGCAATTGAGAACAGAGCTGGACCAGAGAAACATCAAGCAGTTGCATTAAGAGTAAATGCAGATTTAACAGCATTTTACAAATGCGCAATTTATGGTTACCAAGACACACTTTATGTCCACTCATTCAGACAATTCTACCGCGAATGCGACATTTACGGGACAATAGATTTCATATTTGGTAACGCCGCAGTAGTATTACAAGAATGCGACATCGTATCAAGAATGCCATTACCTGGTCAATTTACAGTTATAACCGCGCAATCACGGGATAACCCTGACGAAGACACGGGAATTTCAATCCAAAATTGTTCGATTATCGCTACGGATGAGCTTTATTCAAACTCTAGTAAGGTCAAGAGTTACCTTGGGAGGCCGTGGAGGGTTTTTTCTAGAACGGTTTTAATTGAGTCTTATATTGATGATTTTATTGATCAAAAGGGTTGGACCAAATGGTCAAATGATCAAGGTTTGGATACATTGTTTTATGGTGAATATGAAAATTATGGACCTGGTTCAAAGATTGATAATCGTGTTGAATGGGTTGGTTATCATTTGATGGATTATAATGATGCATATAATTTCAGTGTTTCTGAGTTTATTATTGGTGATCAATGGCTTGAGTCTACTTCAGTTCCTTATGATGATGGAATTTGA 1605 0.3645 MASSSHKLFILLFTILFSLTLPLNTNTSITTSLNPNKLTSLKSLCKTTPYPKLCFNSLKLSISININPNIITYLLHSLQLAISETTKLSNLFHDVGTSNIVEKQRGSIQDCKELHQSTLTSLKRSLSGIRSSNKRNIADARIYLSAALTNKNTCLDGLDSASGTYKPILVDSIINTYKHVSNSLSMLSNHAPEPSNQKGHNKNLVSPKWLSKRLDFDEYDPNEMLVVSADGSGNFSTINDAINFAPNNSLVRIVIYVKEGYYDENVEIPSYKTNIVMLGDGSDSTVITGNRSVVDGWTTFRSATLAVSGDGFLARDIAIENRAGPEKHQAVALRVNADLTAFYKCAIYGYQDTLYVHSFRQFYRECDIYGTIDFIFGNAAVVLQECDIVSRMPLPGQFTVITAQSRDNPDEDTGISIQNCSIIATDELYSNSSKVKSYLGRPWRVFSRTVLIESYIDDFIDQKGWTKWSNDQGLDTLFYGEYENYGPGSKIDNRVEWVGYHLMDYNDAYNFSVSEFIIGDQWLESTSVPYDDGI* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1714 534 Gene3D Invertase/pectin methylesterase inhibitor family protein 38 189 IPR035513 -
Mtr2g1714 534 SUPERFAMILY Pectin lyase-like 222 531 IPR011050 -
Mtr2g1714 534 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 41 188 IPR035513 -
Mtr2g1714 534 Gene3D - 220 534 IPR012334 -
Mtr2g1714 534 PANTHER PECTINESTERASE 7 533 - -
Mtr2g1714 534 CDD PMEI-like_3 43 189 - -
Mtr2g1714 534 Pfam Plant invertase/pectin methylesterase inhibitor 41 186 IPR006501 GO:0004857
Mtr2g1714 534 PANTHER PECTINESTERASE 7 533 - -
Mtr2g1714 534 Pfam Pectinesterase 225 520 IPR000070 GO:0030599|GO:0042545
Mtr2g1714 534 TIGRFAM PME_inhib: pectinesterase inhibitor domain 13 190 IPR006501 GO:0004857
Mtr2g1714 534 ProSitePatterns Pectinesterase signature 2. 368 377 IPR033131 -
Mtr2g1714 534 SMART PMEI_2 36 186 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1714 Mtr-Chr2 19662249 19665162 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1714 32 534 Carbohydrate Esterase AT2G26440 65.192 0.0 689
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1714 - - gmx:100776969 813.142