Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1707 ATGATGTTCCATTTTCAGGGTGTGTCAAGACATTGTAGTCTTCTTGCTGTTCTTAGTGGTAAATCACATGATAGTAAACAAAAGCAGAAGCAGAAGCAGGATGATGATGCTTCTGAGGATCAATTTTCGTCGTACCCGTTTCCGGAACTTTCTTCGTCCGGGCGACTTGAGGTTAAAGTGTTGACTAAACCTACTTTCGATGAACTTGCTCGAGTTCTAGAACAACTGCAGCCGGATTTTGTTTACTTGCAAGGTCAGCAGTTAGATGATAGTGGAGAAATCGGGTCTCTTGTGTGGGAAGATTTTGACCTGTCTACCCCGGAAGCCTTGTGTGGATTATTTTCTTCCAAATTACCTAATACCGTTTATTTGGAAACTCCTAAGGGCGAAAAATTGGCAGAGGCACTACATTCTAAGGGAGTACCTTACACTATTTACTGGAAAAATGAATTTTCAAAGTCTGCAGCTTCACATTTTCATCAAGCTTTTTTCTCAGTGGCACAGAGTACATCCAGCCATACATGGGATGCTTTCCAACTTGCTCAGTCATCTTTTAGACTATACTGTGTGCAAAATGAGGTCATACCTCACAACAGTCAGAAGGGCAGCGATAAGGTTGGACCAAAAATTCTCGGGGAACCTCCTAACATTGAAGTTGGTCCATGTGAAGCAGACACGAAGGAAGATGAAGAAGATTCACCTGAGACTAGTTCTTCTATAAAGATATATGATGATGATGTGAACACGAGATTTCTTCTTTGTGGATTTCCCTGCACAGTGGATGCGTGCTTATTGGAGTCATTAGAGGATGGACTCAATGCTCTCCTATGTACTGAAATACGGGGATGTAAACTTCAAAATCGGACAAGTGCTCCACCACCTCCTCTCCAAGCAGCAACATTCTCACGCGGCGTGGTGACCATGCGCTGTGATATATCCACGTCTAGTTCTGCTCATATATCACTTTTGGTGTCCGGTAGTGCAGACGCTTGTTTCAATGATCAGCTTTTGGAGAATCATATTAAGAAAGAGCTCACCGAGAATAGTCAACTTGTCCAGGCAATTCCTAGCCATGAACAAAATAAACTACCTTCATACGAGCCTCGAAGATCAGCTTCAGTAGCCTGTGGATCTAGTGTGTTTGAAGTTTGTATGCGTGTTCCTACATGGGCTTCACAGGTTCTTAGACAACTTGCACCGAATGTGTCATACCGCTGCCTAGTTATGTTAGGCGTTGCTAGTATTCAAGGATTATCAGTTGCTTCTTTTACTAAAGATGATGCAGAACGTCTTCTTTTCTTCTGTAATCGGCAGGAGAAAGATAACTGCTCCAAAGATATTGTTTTCTCTAGCCATCCTAGTTGGTTGATGCCTCCAGCACCTAGTCGAAAAAGATCCGAACCAGAATCATGCTCTAGAGTTAAATCTATCAATGCTAGTGGCGTGAAAGTTGAAGATAATGGCAGTGATAGGCAGAAATTAAGTTTTGCTGCAATGAGGCCAATCCCTCAGTCTCATCGCCAAAAGCTTCTCCCTTTTTCAGGATATTTTGAGGGAGAAAAATATGATGGAGACCGTGGAAAATCAAATCAGCCTCTTGTTCCAATTAAGCACAATGGTTTAGGTTCTCGTTCAGTTACAAACAGAAAATCTGTGTCAAACTCGTTTCAAGCTCACCAGATAATATCTTTGAATCCACTACCAATGAAAAAACATGGCTGCGACAGAGCTCCAATACGAGTTTGCTCAGAGGAGGAATTCCTGAAGGATGTAATGCAATTTCTGGTTCTTCGAGGGCATACTCGCCTCATTCCACAAGGTGGCCTTGCTGAGTTCCCTGATGCCGTTCTGAATGCTAAACGTCTGGATCTTTTTAACTTGTATAGAGAGGTGGTTTCAAGAGGAGGCTTTCATGTTGGGAATGGTATCAATTGGAAAGGACAAGTTTTCTCAAAGATGAGCAATCACACTCTGACACATAGAATGACAGGTGTTGGCAATACACTCAAAAGACATTACGAAACTTATCTTTTAGAATATGAATTAGCTCATGATGATGTAGATGGCGAATGCTGCTTATTGTGTCACAGTAGCGCAGCAGGTGACTGGGTGAACTGTGGTATGTGTGGTGAGTGGGCTCATTTTGGTTGTGATAGGCGGCAAGGACTCGGAGCATTTAAGGACTACGCGAAAACTGATGGGCTGGAGTACGTTTGTCCACACTGCAGCATGTCAAATTTCAGTAAAAAATCGCAGAAAACTGCAAATGGTTATTAA 2277 0.4251 MMFHFQGVSRHCSLLAVLSGKSHDSKQKQKQKQDDDASEDQFSSYPFPELSSSGRLEVKVLTKPTFDELARVLEQLQPDFVYLQGQQLDDSGEIGSLVWEDFDLSTPEALCGLFSSKLPNTVYLETPKGEKLAEALHSKGVPYTIYWKNEFSKSAASHFHQAFFSVAQSTSSHTWDAFQLAQSSFRLYCVQNEVIPHNSQKGSDKVGPKILGEPPNIEVGPCEADTKEDEEDSPETSSSIKIYDDDVNTRFLLCGFPCTVDACLLESLEDGLNALLCTEIRGCKLQNRTSAPPPPLQAATFSRGVVTMRCDISTSSSAHISLLVSGSADACFNDQLLENHIKKELTENSQLVQAIPSHEQNKLPSYEPRRSASVACGSSVFEVCMRVPTWASQVLRQLAPNVSYRCLVMLGVASIQGLSVASFTKDDAERLLFFCNRQEKDNCSKDIVFSSHPSWLMPPAPSRKRSEPESCSRVKSINASGVKVEDNGSDRQKLSFAAMRPIPQSHRQKLLPFSGYFEGEKYDGDRGKSNQPLVPIKHNGLGSRSVTNRKSVSNSFQAHQIISLNPLPMKKHGCDRAPIRVCSEEEFLKDVMQFLVLRGHTRLIPQGGLAEFPDAVLNAKRLDLFNLYREVVSRGGFHVGNGINWKGQVFSKMSNHTLTHRMTGVGNTLKRHYETYLLEYELAHDDVDGECCLLCHSSAAGDWVNCGMCGEWAHFGCDRRQGLGAFKDYAKTDGLEYVCPHCSMSNFSKKSQKTANGY* 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1707 758 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 4 4 758 IPR042293 -
Mtr2g1707 758 SMART ARID_2 578 681 - -
Mtr2g1707 758 MobiDBLite consensus disorder prediction 23 48 - -
Mtr2g1707 758 SUPERFAMILY ARID-like 582 696 IPR036431 GO:0003677
Mtr2g1707 758 Gene3D - 579 684 IPR036431 GO:0003677
Mtr2g1707 758 ProSiteProfiles ARID domain profile. 581 685 IPR001606 GO:0003677
Mtr2g1707 758 MobiDBLite consensus disorder prediction 23 39 - -
Mtr2g1707 758 CDD PHD_ARID4_like 691 742 - -
Mtr2g1707 758 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 685 749 IPR013083 -
Mtr2g1707 758 Pfam ARID/BRIGHT DNA binding domain 584 681 IPR001606 GO:0003677
Mtr2g1707 758 PANTHER ARID/BRIGHT DNA-BINDING DOMAIN PROTEIN 4 758 - -
Mtr2g1707 758 CDD ARID 583 681 - -
Mtr2g1707 758 SUPERFAMILY FYVE/PHD zinc finger 684 747 IPR011011 -
Mtr2g1707 758 MobiDBLite consensus disorder prediction 199 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1707 Mtr-Chr2 19520628 19528009 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1707 2 757 ARID Transcription Factor Family AT3G43240 65.086 0.0 969
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Mtr2g1707 ARID 8e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1707 - - gmx:100775894 1252.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g1707 2 19520628 19528009 Mtr2g1707 2 19520628 19528009 ECH