Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1699 ATGGGTTCAAGATCTGCGGAAGGAGAACAATCATCGCTCGCTGATGATTATGATGCCTTGATTTCAACCACTGATGTTGAGCTTCTCAAGCGAGCATGGCGTAACGAAAAGGCAGCCCCCGAGATTCTTCGTTTTGAATCTGATTTGATCAACCGCGTCAAAGGACAGATTGAATTGATGGAAGAAACTGTGGAGGAGAAATTGTCTGTTGGTAGTGACCCTCTTTCAGTATCTCTGTATCAGATGGACTTAGATAGAACCTTATTTCTATTAAGGTCATATCTTCGCATCCGCATCCTGAAGATCGAAAAGTACATGTTCCACATCCGAAAAACTCAAGAACTTTGGAACAGGCTTTCTAGGGATGAGAAACTTTTCACTGAAAGGTGCACAGATGACCTGAAGGAACATCTGGAGAGCAGTGTTCTATCGAAACTGCCTGAAAATTATCAGTCTTACGAGAGACAATCTGTCATTAGTGAAGAGGATGACATGGTCCCAGAACCCAGACTAGACACATTTGTTTTGTGTAGAAGTAAAGAATATCTCACAGGAATTCAACTTGAAGATGGACCTGTTGACGACAGGTCGAAGCTGTTTGAGATGGAGCCTGATGTCCTTTACTTCATATGTTACAAGTCGATAAAACCACTTGTAGAGAGTGGGAAAATTGATCTACTATGA 684 0.4196 MGSRSAEGEQSSLADDYDALISTTDVELLKRAWRNEKAAPEILRFESDLINRVKGQIELMEETVEEKLSVGSDPLSVSLYQMDLDRTLFLLRSYLRIRILKIEKYMFHIRKTQELWNRLSRDEKLFTERCTDDLKEHLESSVLSKLPENYQSYERQSVISEEDDMVPEPRLDTFVLCRSKEYLTGIQLEDGPVDDRSKLFEMEPDVLYFICYKSIKPLVESGKIDLL* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1699 227 Pfam DNA replication complex GINS protein SLD5 C-terminus 169 227 IPR031633 -
Mtr2g1699 227 SUPERFAMILY PriA/YqbF domain 171 227 - -
Mtr2g1699 227 PANTHER SLD5 PROTEIN 8 227 IPR008591 GO:0006261
Mtr2g1699 227 CDD GINS_A_Sld5 25 143 IPR038749 -
Mtr2g1699 227 SUPERFAMILY GINS helical bundle-like 22 157 IPR036224 -
Mtr2g1699 227 PIRSF GINS_Sld5 1 227 IPR008591 GO:0006261
Mtr2g1699 227 Gene3D - 12 217 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1699 1 174 Core DNA Replication Machinery Family AT5G49010 60.345 4.92e-67 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1699 K10735 - gmx:100784291 339.732