Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1686 ATGGAATACGGTGGAGGCTCGAAAGTAACCGGGATTAGGCAGATTGTGAGACTCAAAGAAATTCTTCAAAAGTGGCAAAATGTCACAATAAGCTCAAAAACTTCCAACCGCAAACTTGAAATAACTGATGGTTCTAGATCACCAATGATCAACAAAAGGATAACAAATGTCATAAGTTGTGACTCTGATGAGGAAAGCTGCCAAAGTCCTGAACCACCACCTGATGTTCCGAAAGGCTTCTTGGCAGTCTATGTTGGACCCGAGCTTCGACGGTTCATTATTCCAACTAGCTACCTTAGCCATTCCTTATTCAAAATGTTGCTGGAAAAGGCTGCCGAGGAATTCGGATTTGATCAGAGCGGCGGGCTCACAATACCGTGTGAGATTGAGACCTTTAAATATCTACTCAAATGCATTGAGACCCAAGAGAAAGAACAACATGATGAGAGCTTGTCTGCAGCTGGAAACCTAGAAACAGAAGAAACCTTGGAAGAGTAA 498 0.4277 MEYGGGSKVTGIRQIVRLKEILQKWQNVTISSKTSNRKLEITDGSRSPMINKRITNVISCDSDEESCQSPEPPPDVPKGFLAVYVGPELRRFIIPTSYLSHSLFKMLLEKAAEEFGFDQSGGLTIPCEIETFKYLLKCIETQEKEQHDESLSAAGNLETEETLEE* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1686 165 MobiDBLite consensus disorder prediction 145 165 - -
Mtr2g1686 165 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 7 149 IPR003676 GO:0009733
Mtr2g1686 165 PANTHER SMALL AUXIN-UP RNA-RELATED 7 149 - -
Mtr2g1686 165 Pfam Auxin responsive protein 59 139 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1686 Mtr-Chr2 19277308 19280270 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1686 1 161 Calmodulin-binding Proteins AT3G43120 65.476 1.10e-73 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1686 K14488 - pvy:116144715 236.498
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4576 4 59834356 59835955 Mtr2g1686 2 19277308 19280270 PCT